RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZNF878C9JN71 531 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 YES1P07947 543 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 DCTDP32321 178 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 S100A5P33763 92 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 RPS11P62280 158 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTN-201ENST00000348225 HNRNPA0Q13151 305 aaKnown RBP16.48■□□□□ 0.23
PTN-201ENST00000348225 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
PTN-201ENST00000348225 RPUSD3Q6P087 351 aaKnown RBP16.48■□□□□ 0.23
PTN-201ENST00000348225 KLHL24Q6TFL4 600 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 AP3S1Q92572 193 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 NABP1Q96AH0 204 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 SARAFQ96BY9 339 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 LINC00470Q9BZP3 86 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 SLCO5A1Q9H2Y9 848 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 CRLF2Q9HC73 371 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 GP6Q9HCN6 339 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 PEX16Q9Y5Y5 336 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 ZNF879B4DU55 563 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 KRT33AO76009 404 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 PDGFAP04085 211 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 CLEC2LP0C7M8 214 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 MAPK3P27361 379 aaPredicted RBP16.48■□□□□ 0.23
PTN-201ENST00000348225 TMPRSS3P57727 454 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 WDR38Q5JTN6 314 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 CFAP77Q6ZQR2 320 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 TPRA1Q86W33 373 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 SIAH3Q8IW03 269 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 TUSC5Q8IXB3 177 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 PRSS35Q8N3Z0 413 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 THRSPQ92748 146 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 ALKBH3Q96Q83 286 aaPredicted RBP16.48■□□□□ 0.23
PTN-201ENST00000348225 ZNF416Q9BWM5 594 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 BARHL1Q9BZE3 327 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 NIPAL2Q9H841 368 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 CALHM2Q9HA72 323 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 HMG20AQ9NP66 347 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 GTF2A1LQ9UNN4 478 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 B3GNT3Q9Y2A9 372 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 IQCMA0A1B0GVH7 501 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 LOC110117498-PIK3R3F6TDL0 507 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 DVL2O14641 736 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 INHBBP09529 407 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 UCHL1P09936 223 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 TAF13Q15543 124 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 STK11Q15831 433 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 UNQ9370/PRO34162Q6UXP9 181 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 CATSPERDQ86XM0 798 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 RBMXL3Q8N7X1 1067 aaKnown RBP16.47■□□□□ 0.23
PTN-201ENST00000348225 GJC3Q8NFK1 279 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 OR14A2Q96R54 314 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 TAAR6Q96RI8 345 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 GPR35Q9HC97 309 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 PLSCR2Q9NRY7 297 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 LOC400499M0QZD8 3231 aa16.47■□□□□ 0.23
PTN-201ENST00000348225 TRAV1-2A0A0B4J238 106 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
PTN-201ENST00000348225 HSD11B1P28845 292 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 KIR3DL2P43630 455 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 BMXP51813 675 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 ZNF846Q147U1 533 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 Q499Y3 187 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 HSD17B12Q53GQ0 312 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 FAM27BQ5VT28 67 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 PLXDC2Q6UX71 529 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 P4HA3Q7Z4N8 544 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 OR10S1Q8NGN2 331 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 GPR148Q8TDV2 347 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 RGP1Q92546 391 aaPredicted RBP16.46■□□□□ 0.23
PTN-201ENST00000348225 HTRA1Q92743 480 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 KCNS3Q9BQ31 491 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 WDR12Q9GZL7 423 aaKnown RBP16.46■□□□□ 0.23
PTN-201ENST00000348225 SMURF1Q9HCE7 757 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 TMEM38BQ9NVV0 291 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 FBXL3Q9UKT7 428 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 CLEC4AQ9UMR7 237 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 CFAP47Q6ZTR5 3102 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 APC2O95996 2303 aa16.46■□□□□ 0.23
PTN-201ENST00000348225 TMEM269A0A1B0GVZ9 245 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 SHISA3A0PJX4 238 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CLDN25C9JDP6 229 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 SRSF10O75494 262 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 PNPP00491 289 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CRYABP02511 175 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 MMP16P51512 607 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 GRB2P62993 217 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 MFGE8Q08431 387 aaPredicted RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 ENDOGQ14249 297 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 TBR1Q16650 682 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CEACAM16Q2WEN9 425 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 FAM27D1Q5T7N8 215 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CROCCP3Q8IVE0 287 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 APH1AQ96BI3 265 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 ZNF837Q96EG3 531 aaPredicted RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 FOXB1Q99853 325 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 PPIL3Q9H2H8 161 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 MOB1AQ9H8S9 216 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 PLGRKTQ9HBL7 147 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 AKIP1Q9NQ31 210 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms