RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GPR137CQ8N3F9 429 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PRSS35Q8N3Z0 413 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR5AK2Q8NH90 309 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 GPR148Q8TDV2 347 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC22A18Q96BI1 424 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 IP6K3Q96PC2 410 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PDCD1LG2Q9BQ51 273 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SUCNR1Q9BXA5 334 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DPH1Q9BZG8 443 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ACTR3CQ9C0K3 210 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 COMMD4Q9H0A8 199 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC35B3Q9H1N7 401 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PRO1933Q9H354 126 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PRSS16Q9NQE7 514 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 FAM212BQ9NTI7 297 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 LUZP4Q9P127 313 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 RBPJLQ9UBG7 517 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PRODH2Q9UF12 536 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ICAM5Q9UMF0 924 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 STRAPQ9Y3F4 350 aaKnown RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 V9GYS6 101 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CCDC187A0A096LP49 1063 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 TRBV5-5A0A0J9YX44 114 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM269A0A1B0GVZ9 245 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 A0A1W2PPE2 198 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 DUXAA6NLW8 204 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 EEF1E1-BLOC1S5C9J1V9 151 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 RAB27BO00194 218 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 PLPP1O14494 284 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 DLEU1O43261 78 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 LRP3O75074 770 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 DFFBO76075 338 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 GCGP01275 180 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 OR5AC1P0C628 307 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FCARP24071 287 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 MSX1P28360 303 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 SNCAP37840 140 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 UCP2P55851 309 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 TAS2R38P59533 333 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 BPIFB3P59826 476 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 STXBP1P61764 594 aaKnown RBP7.36□□□□□ -1.23
ATG4A-201ENST00000343524 RPS23P62266 143 aaKnown RBP7.36□□□□□ -1.23
ATG4A-201ENST00000343524 RAC1P63000 192 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FAM3AP98173 230 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 GLO1Q04760 184 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ZP2Q05996 745 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FUT5Q11128 374 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 LASP1Q14847 261 aaKnown RBP7.36□□□□□ -1.23
ATG4A-201ENST00000343524 RAB11BQ15907 218 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 DCAF10Q5QP82 559 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FRRS1Q6ZNA5 592 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 SLC35D2Q76EJ3 337 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF584Q8IVC4 421 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ARL14Q8N4G2 192 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ZSCAN4Q8NAM6 433 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-201ENST00000343524 KLHDC9Q8NEP7 349 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FAM174AQ8TBP5 190 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM239Q8WW34 195 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 AMDHD1Q96NU7 426 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 GPR174Q9BXC1 333 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 SLC5A7Q9GZV3 580 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 RAB18Q9NP72 206 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 LHX9Q9NQ69 397 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF223Q9UK11 482 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FBXO4Q9UKT5 387 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 FBXL21Q9UKT6 434 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 MED31Q9Y3C7 131 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 ATG4BQ9Y4P1 393 aa7.36□□□□□ -1.23
ATG4A-201ENST00000343524 A0A1W2PQ45 241 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 A0A1W2PQY0 241 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 LNP1A1A4G5 178 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NPIPB15A6NHN6 443 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CYTIPO60759 359 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CSTBP04080 98 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NPPBP16860 134 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CTHP32929 405 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NCBP2P52298 156 aaKnown RBP eCLIP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PPP1R1AQ13522 171 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SSPNQ14714 243 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SLC9A5Q14940 896 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TGIF1Q15583 401 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ZNHIT3Q15649 155 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SCGB2B2Q4G0G5 96 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 MMP21Q8N119 569 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 KDM8Q8N371 416 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 LRRC18Q8N456 261 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TRAM1L1Q8N609 369 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 OR9K2Q8NGE7 335 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CD300LFQ8TDQ1 290 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF480Q8WV37 535 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 MUCL1Q96DR8 90 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 RRNAD1Q96FB5 475 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CASD1Q96PB1 797 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms