RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 OR13C5Q8NGS8 318 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 OR2G2Q8NGZ5 317 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 SNRNP27Q8WVK2 155 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 APH1AQ96BI3 265 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 GPR137Q96N19 417 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 LINC00470Q9BZP3 86 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 GPR35Q9HC97 309 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 FRRS1LQ9P0K9 344 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 GTF2A1LQ9UNN4 478 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 SPENQ96T58 3664 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 NCOR2Q9Y618 2525 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 OR14I1A6ND48 311 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 OR6C65A6NJZ3 312 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF254O75437 659 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 CDRT1O95170 752 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 SERPINA3P01011 423 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 AGTR1P30556 359 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 OPRL1P41146 370 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ADGRE4PQ86SQ3 457 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ABHD4Q8TB40 342 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ZCCHC14Q8WYQ9 949 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 C4orf45Q96LM5 186 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 FOXB1Q99853 325 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 SLC7A10Q9NS82 523 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 TMEM38BQ9NVV0 291 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 CCDC59Q9P031 241 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 FBXL3Q9UKT7 428 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF281Q9Y2X9 895 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 CACNA1GO43497 2377 aa11.45□□□□□ -0.58
CCDC7-202ENST00000302316 PRRC2CQ9Y520 2896 aaKnown RBP11.45□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF878C9JN71 531 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 TAF4O00268 1085 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 DVL2O14641 736 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 RER1O15258 196 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 CLPXO76031 633 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ZFPL1O95159 310 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 B4GALT1P15291 398 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 NPR2P20594 1047 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 PAX7P23759 505 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 PEX19P40855 299 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 MXD1Q05195 221 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ENDOGQ14249 297 aaKnown RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ACSM3Q53FZ2 586 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 DEGS2Q6QHC5 323 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 NUFIP2Q7Z417 695 aaKnown RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF100Q8IYN0 542 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 OR10S1Q8NGN2 331 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 OR5AK2Q8NH90 309 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 COMMD4Q9H0A8 199 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 GP6Q9HCN6 339 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF587BE7ETH6 402 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 SOX6P35712 828 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 RPS19P39019 145 aaKnown RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 MFGE8Q08431 387 aaPredicted RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 YIF1BQ5BJH7 314 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 CEACAM19Q7Z692 300 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF676Q8N7Q3 588 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 GMPPAQ96IJ6 420 aaPredicted RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 SLIRPQ9GZT3 109 aaKnown RBP11.44□□□□□ -0.58
CCDC7-202ENST00000302316 C12orf49Q9H741 205 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 SIAEQ9HAT2 523 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 SNTG1Q9NSN8 517 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 UPB1Q9UBR1 384 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 R4GMQ9 66 aa11.44□□□□□ -0.58
CCDC7-202ENST00000302316 ATMQ13315 3056 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 TMEM212A6NML5 194 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 OR4C45A6NMZ5 311 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 LOC110117498-PIK3R3F6TDL0 507 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 CASKO14936 926 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 SS18L1O75177 396 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 SC5DO75845 299 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 PNPP00491 289 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 IL1AP01583 271 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 HSD11B1P28845 292 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 SDC2P34741 201 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 KIR3DL2P43630 455 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 RPS11P62280 158 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 TAF13Q15543 124 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 ODF4Q2M2E3 257 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF829Q3KNS6 432 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 ACSF3Q4G176 576 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 FAM27BQ5VT28 67 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF585AQ6P3V2 769 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 FDX2Q6P4F2 183 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 UBE2J2Q8N2K1 259 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 GJC3Q8NFK1 279 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 GLRX2Q9NS18 164 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 EMC9Q9Y3B6 208 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 PMF1-BGLAPU3KQ54 211 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 CACNA1CQ13936 2221 aa11.43□□□□□ -0.58
CCDC7-202ENST00000302316 PHF3Q92576 2039 aaKnown RBP11.43□□□□□ -0.58
CCDC7-202ENST00000302316 AHRRA9YTQ3 701 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 CCR9P51686 369 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms