RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 UBBP0CG47 229 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 UBCP0CG48 685 aaKnown RBP12.05□□□□□ -0.48
CASC4-201ENST00000299957 HRH1P35367 487 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 HERV-K104P61576 105 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 PDCD1Q15116 288 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 GLIPR1L1Q6UWM5 242 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 LANCL3Q6ZV70 420 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 SYS1Q8N2H4 156 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 MIB2Q96AX9 1013 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 RANBP2P49792 3224 aaKnown RBP12.05□□□□□ -0.48
CASC4-201ENST00000299957 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 OR8U9P0C7N5 309 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 TUBG1P23258 451 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 STK11Q15831 433 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 TMEM244Q5VVB8 128 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 FJX1Q86VR8 437 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 HSD17B11Q8NBQ5 300 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 RAB3CQ96E17 227 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 PRRT1Q99946 306 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
CASC4-201ENST00000299957 A0A087WUJ7 227 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 FAM221BA6H8Z2 402 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 H0YIG0 161 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ZNF749O43361 778 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ALOX5APP20292 161 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 BDKRB2P30411 391 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 OPRM1P35372 400 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 PWWP2BQ6NUJ5 590 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 SLC51BQ86UW2 128 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 SLC2A12Q8TD20 617 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ARL11Q969Q4 196 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ZNF649Q9BS31 505 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ZNF230Q9UIE0 474 aaPredicted RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 DKKL1Q9UK85 242 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 HRH3Q9Y5N1 445 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 NGFRP08138 427 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 GIPP09681 153 aaPredicted RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 EPHA1P21709 976 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 BDH1Q02338 343 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 HACD4Q5VWC8 232 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 TMEM59Q9BXS4 323 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 SLC5A7Q9GZV3 580 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 WWTR1Q9GZV5 400 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 TAS2R5Q9NYW4 299 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 ELF5Q9UKW6 265 aaPredicted RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 FOXJ3Q9UPW0 622 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 FREM3P0C091 2139 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 TRAV36DV7A0A075B6V5 113 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 PLRG1O43660 514 aaKnown RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 TSPAN15O95858 294 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 IGKV1D-16P01601 117 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 PTBP1P26599 531 aaKnown RBP eCLIP12.04□□□□□ -0.486e-7■■■■■ 27.6
CASC4-201ENST00000299957 CAMLGP49069 296 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 H3F3CQ6NXT2 135 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 CPEB2Q7Z5Q1 589 aaKnown RBP12.04□□□□□ -0.48
CASC4-201ENST00000299957 PLXDC1Q8IUK5 500 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 FRRS1LQ9P0K9 344 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ZMIZ1Q9ULJ6 1067 aa12.04□□□□□ -0.48
CASC4-201ENST00000299957 ATG12O94817 140 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 NSA2O95478 260 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 DRD1P21728 446 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 HLXQ14774 488 aaPredicted RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 RSU1Q15404 277 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 PHLDA2Q53GA4 152 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 TMEM200AQ86VY9 491 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 ADAT1Q9BUB4 502 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 CSAG2Q9Y5P2 127 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 H7C417 338 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 PHYHO14832 338 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 LPLP06858 475 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 CTLA4P16410 223 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 ABOP16442 354 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 SERPINF1P36955 418 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 RPL27P61353 136 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 ACY1Q03154 408 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 GLDNQ6ZMI3 551 aaPredicted RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 ESX1Q8N693 406 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 ZNRF4Q8WWF5 429 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 TCTN2Q96GX1 697 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 RADILQ96JH8 1075 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 ZNF416Q9BWM5 594 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 MMP25Q9NPA2 562 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 KCNIP3Q9Y2W7 256 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 IGHV3-15A0A0B4J1V0 119 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms