RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Aldh9a1Q9JLJ2 494 aa20.56■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Nkain4Q9JMG4 208 aa20.56■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Skp2Q9Z0Z3 424 aa20.56■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Slc7a7Q9Z1K8 510 aa20.56■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Kiaa1324A2AFS3 1009 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ggta1l1A2AUQ7 319 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Mup3P04939 184 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Cav3P51637 151 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ccr1l1P51676 356 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Slc1a3P56564 543 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Dgcr2P98154 548 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gch1Q05915 241 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Dvl2Q60838 736 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfml2aQ8BHP7 681 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 FkrpQ8CG64 494 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 TifabQ8JZM6 147 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr214Q8VG27 320 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 AldobQ91Y97 364 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Tstd3Q9D0B5 157 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Sdf2Q9DCT5 211 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Acox3Q9EPL9 700 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 CrebbpP45481 2441 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Trbc1A0A0A6YWV4 173 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr239A0PK55 315 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr723E9PZU2 309 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr294F7CWV4 335 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr724K7N5X7 309 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr55K7N6Q1 315 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Csn1s1P19228 313 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Rln1P47932 185 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 SrmsQ62270 496 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr1140Q7TR39 311 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Q80UB0 333 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 SargQ8BI29 606 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 LiphQ8CIV3 451 aa20.55■□□□□ 0.88
Upf3a-201ENSMUST00000043767 TprF6ZDS4 2431 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Fnd3c2A2AP83 941 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Zfp735B1ARH2 734 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Vmn2r36K7N741 852 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Rad51dO55230 329 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 P01795 144 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 GrnP28798 589 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Zdhhc2P59267 366 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Arhgef9Q3UTH8 516 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Nlrc3Q5DU56 1064 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 TecrlQ8BFZ1 361 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 BivmQ8CBX9 502 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 AspaQ8R3P0 312 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ugt2b37Q8VCN3 530 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 CytipQ91VY6 359 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Mrgpra1Q91WW5 304 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Trappc2Q9CQP2 140 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 TrdcA0A0G2JEU3 153 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Vmn1r12G5E8G1 307 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Taf6Q62311 678 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Lefty1Q64280 368 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Marveld1Q7TQJ1 173 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 BspryQ80YW5 473 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Spata2lQ8BNN1 426 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Grk5Q8VEB1 590 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr820Q8VFU5 312 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Slc27a4Q91VE0 643 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Dimt1Q9D0D4 313 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Tspan32Q9JHH2 256 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 ClpxQ9JHS4 634 aaKnown RBP20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Thsd1Q9JM61 851 aa20.54■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Cfap46E9Q2C0 2641 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ighv1-54A0A075B5W5 117 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr1056A2AVY0 313 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm11127A7VMS2 374 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm43720E0CXM8 267 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm9008E9PVG0 424 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr746E9Q840 314 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm2663F6R7E8 247 aaKnown RBP20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm6401L7N2C0 213 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Rpl18P35980 188 aaKnown RBP20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Crmp1P97427 572 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Bcl2l15Q08ED0 167 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 ScocQ78YZ6 125 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Adprhl1Q8BGK2 353 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr815Q8VFU0 316 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 1810009J06RikQ9CPN7 247 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Dmac2Q9D7K5 258 aaKnown RBP20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Dnajb8Q9QYI7 227 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Hey1Q9WV93 299 aa20.53■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm21936A0A1Y7VJE9 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm5788A0A1Y7VK80 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Btbd8D3YUB6 377 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm5039J3QNT6 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Rnf13O54965 381 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Apoc3P33622 99 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Lad1P57016 528 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Shc1P98083 579 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm2016Q3TQZ4 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Nxpe2Q3U095 558 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm8332Q3UTA4 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm7534Q3UU21 679 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ptp4a1Q63739 173 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Il17fQ7TNI7 161 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 IfnkQ7TSL0 199 aa20.52■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms