RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SGCEO43556 437 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 GLI4P10075 376 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 TPT1P13693 172 aaKnown RBP13.05□□□□□ -0.32
SCARB2-208ENST00000638372 NFYAP23511 347 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-208ENST00000638372 OPCMLQ14982 345 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 BAK1Q16611 211 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 CCDC74BQ96LY2 380 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 SIGLEC7Q9Y286 467 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 MCRIP1C9JLW8 97 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 TBX19O60806 448 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 NPY4RP50391 375 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 C12orf73Q69YU5 71 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 ZFAND1Q8TCF1 268 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 KTI12Q96EK9 354 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-208ENST00000638372 SNX18Q96RF0 628 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 RAB22AQ9UL26 194 aa13.05□□□□□ -0.32
SCARB2-208ENST00000638372 ZNFX1Q9P2E3 1918 aaKnown RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 SHISA8B8ZZ34 492 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF14P17017 642 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 OR4D6Q8NGJ1 314 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 PBDC1Q9BVG4 233 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 DUSP13Q9UII6 198 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF638Q14966 1978 aaKnown RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF814B7Z6K7 855 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 EML2O95834 649 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 HLA-BQ31612 363 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 KRBOX4Q5JUW0 171 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 C6orf15Q6UXA7 325 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 C16orf47Q6ZP98 133 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ST8SIA1Q92185 356 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 TXNIPQ9H3M7 391 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 FRG2CA6NGY1 282 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 IFITM5A6NNB3 132 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 GABARAPH6UMI1 98 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 CSF3P09919 207 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 CALCBP10092 127 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 CCL7P80098 99 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 RIPPLY1Q0D2K3 151 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 SRSF5Q13243 272 aaKnown RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 INSL4Q14641 139 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 TMEM43Q9BTV4 400 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF436Q9C0F3 470 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 SLIRPQ9GZT3 109 aaKnown RBP13.04□□□□□ -0.32
SCARB2-208ENST00000638372 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 A0A087WUJ7 227 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 SLC22A23A1A5C7 686 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 STK17BO94768 372 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 SOD1P00441 154 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 RAF1P04049 648 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 CT62P0C5K7 136 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 OMGP23515 440 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 GABRA2P47869 451 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 RRADP55042 308 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 ASAH1Q13510 395 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
SCARB2-208ENST00000638372 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 IGHV3-64DA0A0J9YX35 117 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 KLRC4-KLRK1H3BQV0 150 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 CXCL13O43927 109 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 EIF4EP06730 217 aaKnown RBP13.03□□□□□ -0.32
SCARB2-208ENST00000638372 ACHEP22303 614 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 TAS2R20P59543 309 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 FOXF1Q12946 379 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF425Q6IV72 752 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 PGAP1Q75T13 922 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 CMTM4Q8IZR5 234 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 OR2G2Q8NGZ5 317 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 GPBAR1Q8TDU6 330 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 MUCL1Q96DR8 90 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 ISYNA1Q9NPH2 558 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 CCDC88CQ9P219 2028 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 SERTM1A2A2V5 107 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 TTLL8A6PVC2 850 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 FOLR1P15328 257 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 NAGAP17050 411 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 MSR1P21757 451 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 HMGA2P52926 109 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 TCEAL3Q969E4 200 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 LRRC46Q96FV0 321 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 DDOQ99489 341 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 TRAPPC2LQ9UL33 140 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 A0A0B4J2E0 115 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 A0A1B0GX12 115 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms