RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RERGLQ9H628 205 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 STUB1Q9UNE7 303 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PROCRQ9UNN8 238 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 DIMT1Q9UNQ2 313 aaKnown RBP12.76□□□□□ -0.37
LINC00339-208ENST00000634934 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF670-ZNF695F2Z2N8 137 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-208ENST00000634934 UPK3AO75631 287 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 SSX1Q16384 188 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF362Q5T0B9 420 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-208ENST00000634934 TSPO2Q5TGU0 170 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 NANOGP1Q8N7R0 232 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 NPEPL1Q8NDH3 523 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 CCDC120Q96HB5 630 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 CENPOQ9BU64 300 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 ALG12Q9BV10 488 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 OPN3Q9H1Y3 402 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-208ENST00000634934 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 FN3KQ9H479 309 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 RPRD1BQ9NQG5 326 aaKnown RBP12.75□□□□□ -0.37
LINC00339-208ENST00000634934 SLC7A10Q9NS82 523 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 UPB1Q9UBR1 384 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 PRSS50Q9UI38 385 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 ARHGAP21Q5T5U3 1957 aa12.75□□□□□ -0.37
LINC00339-208ENST00000634934 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 OR6C68A6NDL8 312 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 OR6C65A6NJZ3 312 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 FAM183AA6NL82 134 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 SNTNA6NMZ2 147 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PRR23D1E9PI22 279 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 DVL2O14641 736 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 IL18BPO95998 194 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 IL1AP01583 271 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 APOA1P02647 267 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 QDPRP09417 244 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PRR23D2P0DMB1 279 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 DBTP11182 482 aaKnown RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PAICSP22234 425 aaKnown RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PSMA1P25786 263 aaKnown RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 FMODQ06828 376 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 DBPQ10586 325 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 SPHARQ15513 63 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PHYHD1Q5SRE7 291 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 MTFR2Q6P444 385 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PLBD1Q6P4A8 553 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 MYO7BQ6PIF6 2116 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 TFAP2EQ6VUC0 442 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 CPOQ8IVL8 374 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 POMGNT2Q8NAT1 580 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 OR9Q1Q8NGQ5 310 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 LRR1Q96L50 414 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 COQ7Q99807 217 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 SLC30A2Q9BRI3 323 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 ULBP2Q9BZM5 246 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 C6orf62Q9GZU0 229 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 MED20Q9H944 212 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 FGF20Q9NP95 211 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
LINC00339-208ENST00000634934 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF629Q9UEG4 869 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 PHF3Q92576 2039 aaKnown RBP12.74□□□□□ -0.37
LINC00339-208ENST00000634934 TMEM129A0AVI4 362 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 EEF1E1-BLOC1S5C9J1V9 151 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 EEF1E1O43324 174 aaKnown RBP12.73□□□□□ -0.37
LINC00339-208ENST00000634934 SLC16A7O60669 478 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 CGAP01215 116 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 RNF224P0DH78 156 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 NR2C1P13056 603 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 NUDT6P53370 316 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 ADORA2A-AS1P86434 159 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 FAPQ12884 760 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 NDUFA5Q16718 116 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 LRFN4Q6PJG9 635 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 CXXC5Q7LFL8 322 aaKnown RBP12.73□□□□□ -0.37
LINC00339-208ENST00000634934 AKAP14Q86UN6 197 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 LIX1LQ8IVB5 337 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF610Q8N9Z0 462 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 POC5Q8NA72 575 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 TMEM163Q8TC26 289 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 NSMAFQ92636 917 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 MCHR2Q969V1 340 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 TSSK2Q96PF2 358 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 DDOQ99489 341 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 CHCHD6Q9BRQ6 235 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 NUAK2Q9H093 628 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 HINT3Q9NQE9 182 aaKnown RBP12.73□□□□□ -0.37
LINC00339-208ENST00000634934 ABCB10Q9NRK6 738 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 ASB6Q9NWX5 421 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms