RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 POFUT1Q9H488 388 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 ZMAT3Q9HA38 289 aaKnown RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 UCK1Q9HA47 277 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 CKLFQ9UBR5 152 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 COA3Q9Y2R0 106 aaPredicted RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 LAMA1P25391 3075 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 THADAQ6YHU6 1953 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 A0A1W2PQD3 144 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 M0QYG6 137 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 SDC3O75056 442 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 NPIPB7O75200 414 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 DXOO77932 396 aaKnown RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 CD2P06729 351 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 NMBP08949 121 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 HLA-DOBP13765 273 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 NME1P15531 152 aaKnown RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 POLR2HP52434 150 aaKnown RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 DCAF7P61962 342 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 RGS7BPQ6MZT1 257 aaPredicted RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 SLC25A44Q96H78 314 aaPredicted RBP10.12□□□□□ -0.79
VARS2-213ENST00000625423 LINC00052Q96N35 136 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 WWTR1Q9GZV5 400 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 KCNMB2Q9Y691 235 aa10.12□□□□□ -0.79
VARS2-213ENST00000625423 ZDBF2Q9HCK1 2354 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 TCRBV16S1A1N1A0A5B0 115 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 MFSD2BA6NFX1 497 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 C2CD4DB7Z1M9 353 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 H3BMH7 237 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 PLPP3O14495 311 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SNAPC5O75971 98 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 GABRA1P14867 456 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 PPP3CBP16298 524 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 IL11P20809 199 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SPOCK1Q08629 439 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 EMC9Q9Y3B6 208 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 NUP210LQ5VU65 1888 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 NCOR1O75376 2440 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 A8MVM7 634 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 TEX46H3BTG2 121 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 RAB3DO95716 219 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 MAP2K6P52564 334 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 ACTBP60709 375 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 ACTG1P63261 375 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SORDQ00796 357 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 PXDC1Q5TGL8 231 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 TMED4Q7Z7H5 227 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 GALNT16Q8N428 558 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 STK35Q8TDR2 534 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SCARB1Q8WTV0 552 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 ZDHHC12Q96GR4 267 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 TINAGL1Q9GZM7 467 aaPredicted RBP10.11□□□□□ -0.79
VARS2-213ENST00000625423 PRMT8Q9NR22 394 aaPredicted RBP10.11□□□□□ -0.79
VARS2-213ENST00000625423 PCDH15Q96QU1 1955 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 TTLL8A6PVC2 850 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SOX1O00570 391 aaPredicted RBP10.11□□□□□ -0.79
VARS2-213ENST00000625423 ITGB2P05107 769 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 LPLP06858 475 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 IGFBP3P17936 291 aaPredicted RBP10.11□□□□□ -0.79
VARS2-213ENST00000625423 TAS2R19P59542 299 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 C1orf189Q5VU69 101 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 LRFN4Q6PJG9 635 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 GSG1LQ6UXU4 331 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 PRSS42Q7Z5A4 293 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SPERTQ8NA61 448 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 OR52N5Q8NH56 324 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 GPR119Q8TDV5 335 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 SLC41A2Q96JW4 573 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 CMKLR1Q99788 373 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 MED11Q9P086 117 aa10.11□□□□□ -0.79
VARS2-213ENST00000625423 LMX1BO60663 402 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 ALOX12BO75342 701 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 OR4E1P0C645 316 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 CD38P28907 300 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 DNASE1L1P49184 302 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 ARL4DP49703 201 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 FOXL2P58012 376 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 GLO1Q04760 184 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 MOGAT2Q3SYC2 334 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 B3GNTL1Q67FW5 361 aaPredicted RBP10.1□□□□□ -0.79
VARS2-213ENST00000625423 SLC29A4Q7RTT9 530 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 JAGN1Q8N5M9 183 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 OR13C3Q8NGS6 347 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 OR1L3Q8NH93 324 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 DAZLQ92904 295 aaKnown RBP10.1□□□□□ -0.79
VARS2-213ENST00000625423 TTYH1Q9H313 450 aaPredicted RBP10.1□□□□□ -0.79
VARS2-213ENST00000625423 COPS7AQ9UBW8 275 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 IGHV1OR15-9A0A0B4J2B8 117 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 TMEM82A0PJX8 343 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 RHPN2P1A8MT19 583 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 TO15178 435 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 AHSA1O95433 338 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 AMY2AP04746 511 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 GMFBP60983 142 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 SSBP1Q04837 148 aaKnown RBP10.1□□□□□ -0.79
VARS2-213ENST00000625423 FMODQ06828 376 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms