RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ITGB2P05107 769 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 CLDN18P56856 261 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 RASGEF1BQ0VAM2 473 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 FCRLAQ7L513 359 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 C4orf45Q96LM5 186 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 DCBLD2Q96PD2 775 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 SMAD5Q99717 465 aaKnown RBP19.03■□□□□ 0.64
SPAST-204ENST00000621856 CENPMQ9NSP4 180 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 CMAHPQ9Y471 501 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 KCNMB2Q9Y691 235 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 TMEM212A6NML5 194 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 CYTIPO60759 359 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 ZNF432O94892 652 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 SYNGR4O95473 234 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 ZNF708P17019 499 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 GUCA1AP43080 201 aaPredicted RBP19.02■□□□□ 0.63
SPAST-204ENST00000621856 PHYHD1Q5SRE7 291 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 FDX2Q6P4F2 183 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 IGFL2Q6UWQ7 119 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 BTLAQ7Z6A9 289 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 TPRA1Q86W33 373 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 OR2AJ1Q8NGZ0 328 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 RGP1Q92546 391 aaPredicted RBP19.02■□□□□ 0.63
SPAST-204ENST00000621856 DEFB127Q9H1M4 99 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 LDAHQ9H6V9 325 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 PALMDQ9NP74 551 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 ACKR4Q9NPB9 350 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 CYB5R1Q9UHQ9 305 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 RCE1Q9Y256 329 aa19.02■□□□□ 0.63
SPAST-204ENST00000621856 OR4C45A6NMZ5 311 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 ZNF879B4DU55 563 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 TAF4O00268 1085 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 SLC43A1O75387 559 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 ZNF254O75437 659 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 UCHL1P09936 223 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 H2BFMP0C1H6 154 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 KIR3DL2P43630 455 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 WDR38Q5JTN6 314 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 C10orf128Q5T292 105 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 UNQ9370/PRO34162Q6UXP9 181 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 AAED1Q7RTV5 226 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.01■□□□□ 0.63
SPAST-204ENST00000621856 C20orf196Q8IYI0 205 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 PRSS35Q8N3Z0 413 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 ULBP2Q9BZM5 246 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 C1orf198Q9H425 327 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 POLE4Q9NR33 117 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 UGT2A1Q9Y4X1 527 aa19.01■□□□□ 0.63
SPAST-204ENST00000621856 A0A087WV48 116 aa19■□□□□ 0.63
SPAST-204ENST00000621856 ACTL6AO96019 429 aa19■□□□□ 0.63
SPAST-204ENST00000621856 SPINK2P20155 84 aa19■□□□□ 0.63
SPAST-204ENST00000621856 BCL2A1Q16548 175 aa19■□□□□ 0.63
SPAST-204ENST00000621856 KCNMB1Q16558 191 aa19■□□□□ 0.63
SPAST-204ENST00000621856 SGCAQ16586 387 aa19■□□□□ 0.63
SPAST-204ENST00000621856 HSD17B12Q53GQ0 312 aa19■□□□□ 0.63
SPAST-204ENST00000621856 SPANXN2Q5MJ10 180 aa19■□□□□ 0.63
SPAST-204ENST00000621856 PHYHIPQ92561 330 aa19■□□□□ 0.63
SPAST-204ENST00000621856 HTRA1Q92743 480 aa19■□□□□ 0.63
SPAST-204ENST00000621856 SLAMF6Q96DU3 332 aa19■□□□□ 0.63
SPAST-204ENST00000621856 NOX4Q9NPH5 578 aa19■□□□□ 0.63
SPAST-204ENST00000621856 LIPGQ9Y5X9 500 aa19■□□□□ 0.63
SPAST-204ENST00000621856 TRAV1-2A0A0B4J238 106 aa19■□□□□ 0.63
SPAST-204ENST00000621856 ACOD1A6NK06 481 aa19■□□□□ 0.63
SPAST-204ENST00000621856 EFSO43281 561 aa19■□□□□ 0.63
SPAST-204ENST00000621856 DHHO43323 396 aa19■□□□□ 0.63
SPAST-204ENST00000621856 TNFSF8P32971 234 aa19■□□□□ 0.63
SPAST-204ENST00000621856 ZNF133P52736 654 aaPredicted RBP19■□□□□ 0.63
SPAST-204ENST00000621856 ZNF45Q02386 682 aa19■□□□□ 0.63
SPAST-204ENST00000621856 ODF4Q2M2E3 257 aa19■□□□□ 0.63
SPAST-204ENST00000621856 DEGS2Q6QHC5 323 aa19■□□□□ 0.63
SPAST-204ENST00000621856 ABHD3Q8WU67 409 aa19■□□□□ 0.63
SPAST-204ENST00000621856 RNF133Q8WVZ7 376 aa19■□□□□ 0.63
SPAST-204ENST00000621856 RBM24Q9BX46 236 aaKnown RBP19■□□□□ 0.63
SPAST-204ENST00000621856 FOXD3Q9UJU5 478 aaPredicted RBP19■□□□□ 0.63
SPAST-204ENST00000621856 GDF2Q9UK05 429 aaPredicted RBP19■□□□□ 0.63
SPAST-204ENST00000621856 FBXL3Q9UKT7 428 aa19■□□□□ 0.63
SPAST-204ENST00000621856 LHFPL6Q9Y693 200 aa19■□□□□ 0.63
SPAST-204ENST00000621856 TRGV5A0A0B4J1U4 118 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 TRAV17A0A0B4J275 112 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 CEACAM4O75871 244 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 RAB3BP20337 219 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 CFL1P23528 166 aaKnown RBP18.99■□□□□ 0.63
SPAST-204ENST00000621856 ZNF84P51523 738 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 CCR9P51686 369 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 PPP5CP53041 499 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 PMP22Q01453 160 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 MFGE8Q08431 387 aaPredicted RBP18.99■□□□□ 0.63
SPAST-204ENST00000621856 RNFT1Q5M7Z0 435 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 DDI2Q5TDH0 399 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 LAX1Q8IWV1 398 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 ATF6BQ99941 703 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 ABCB9Q9NP78 766 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 PAQR5Q9NXK6 330 aaPredicted RBP18.99■□□□□ 0.63
SPAST-204ENST00000621856 MCTS1Q9ULC4 181 aaKnown RBP18.99■□□□□ 0.63
SPAST-204ENST00000621856 R4GMQ9 66 aa18.99■□□□□ 0.63
SPAST-204ENST00000621856 PNPP00491 289 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 MSR1P21757 451 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 MAPK3P27361 379 aaPredicted RBP18.98■□□□□ 0.63
SPAST-204ENST00000621856 SOX2P48431 317 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 OR10A3P58181 314 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms