RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 CDK5R1Q15078 307 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 HIST3H3Q16695 136 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 PCK2Q16822 640 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 ZNF404Q494X3 552 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 TP53I3Q53FA7 332 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 MZT2AQ6P582 158 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 KLHL15Q96M94 604 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 INTS14Q96SY0 518 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 HES7Q9BYE0 225 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 BARHL1Q9BZE3 327 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 EXOSC4Q9NPD3 245 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 BOKQ9UMX3 212 aaPredicted RBP11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 NPIPA1Q9UND3 350 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 NCKAP5O14513 1909 aa11.02□□□□□ -0.64
TNFAIP3-211ENST00000621150 SHISA3A0PJX4 238 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 GABRPO00591 440 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 UPK3AO75631 287 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 GLSO94925 669 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 HPNP05981 417 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 PGA4P0DJD7 388 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 PGA3P0DJD8 388 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 TGM4P49221 684 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 CLDN15P56746 228 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 DYNC1I2Q13409 638 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 HYAL4Q2M3T9 481 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 CCDC58Q4VC31 144 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 C22orf42Q6IC83 251 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 RPTNQ6XPR3 784 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 YRDCQ86U90 279 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 UEVLDQ8IX04 471 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 SYT14Q8NB59 555 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 ZBTB34Q8NCN2 500 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 SLC26A10Q8NG04 563 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 OTOSQ8NHW6 89 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 SNRNP40Q96DI7 357 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 SMIM19Q96E16 107 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 PSMG3-AS1Q96PY0 264 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 MMP27Q9H306 513 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 ACOXLQ9NUZ1 547 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 PLA2G3Q9NZ20 509 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 MRM2Q9UI43 246 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 RASD1Q9Y272 281 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 GRIP1Q9Y3R0 1128 aa11.02□□□□□ -0.65
TNFAIP3-211ENST00000621150 TEX15Q9BXT5 2789 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 A0A075B6Q4 140 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 OR5H15A6NDH6 313 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 DVL2O14641 736 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 NME2P1O60361 137 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 EIF1BO60739 113 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SULT1C4O75897 302 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 NAT1P18440 290 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 BIDP55957 195 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 RPS11P62280 158 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SIRPAP78324 504 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 FMODQ06828 376 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 MFAP5Q13361 173 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 INSL4Q14641 139 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 TEX30Q5JUR7 227 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 RPL22L1Q6P5R6 122 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 LINC00696Q6ZRV3 163 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 Q6ZS92 163 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 KCTD20Q7Z5Y7 419 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 ZADH2Q8N4Q0 377 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SNX33Q8WV41 574 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SCMH1Q96GD3 660 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SLC25A44Q96H78 314 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 KCTD7Q96MP8 289 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 AMELYQ99218 206 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 TMED9Q9BVK6 235 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 SRXN1Q9BYN0 137 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 TTTY10Q9BZA0 68 aa11.01□□□□□ -0.65
TNFAIP3-211ENST00000621150 GJE1A6NN92 205 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 CENPBD1B2RD01 187 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 H0YC42 278 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 RGS9O75916 674 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 VAMP5O95183 116 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 HRGP04196 525 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 SP1P08047 785 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 RPS27P42677 84 aaKnown RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 ZNF133P52736 654 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 CLDN20P56880 219 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 RAC3P60763 192 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 CSNK2A1P68400 391 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 ROM1Q03395 351 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 EGR3Q06889 387 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 MRPL49Q13405 166 aaKnown RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 SLC17A1Q14916 467 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 TRAM1Q15629 374 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 ZNF829Q3KNS6 432 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 ARL9Q6T311 187 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 IGFL2Q6UWQ7 119 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 CISD2Q8N5K1 135 aaKnown RBP11□□□□□ -0.65
TNFAIP3-211ENST00000621150 NOXO1Q8NFA2 376 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 OR6N2Q8NGY6 317 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 OR14L1PQ8NHC6 308 aa11□□□□□ -0.65
TNFAIP3-211ENST00000621150 MCFD2Q8NI22 146 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms