RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 HPS1Q92902 700 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 DDIT4LQ96D03 193 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 FN3KQ9H479 309 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 DUSP21Q9H596 190 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 NANSQ9NR45 359 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 CHCHD3Q9NX63 227 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 TRAV36DV7A0A075B6V5 113 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 TMED7-TICAM2A0A0A6YYA0 188 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 A8MVM7 634 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 ATP6V1G2-DDX39BF2Z307 99 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 ETV2O00321 342 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 IDH3BO43837 385 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 LILRA1O75019 489 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 TACSTD2P09758 323 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 PIPP12273 146 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 CCNA2P20248 432 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 MAKP20794 623 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 RPL4P36578 427 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 DVL1P1P54792 670 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 SH3BGRP55822 239 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 RAC3P60763 192 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 AWAT1Q58HT5 328 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 CLEC12AQ5QGZ9 265 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 FBXW9Q5XUX1 488 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 SLC46A3Q7Z3Q1 461 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 GID4Q8IVV7 300 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR6S1Q8NH40 331 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF418Q8TF45 676 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 LIPHQ8WWY8 451 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 SAMD8Q96LT4 415 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 SNX18Q96RF0 628 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 IL4I1Q96RQ9 567 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 GPA33Q99795 319 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 PSORS1C1Q9UIG5 152 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 KLHL21Q9UJP4 597 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 TMED7Q9Y3B3 224 aa15.25■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF724A8MTY0 619 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 XPNPEP2O43895 674 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 CYTIPO60759 359 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 WBP4O75554 376 aaKnown RBP15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 TFAP2AP05549 437 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF3P17036 446 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 SLC35A2P78381 396 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 MIDNQ504T8 468 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 ARMC4Q5T2S8 1044 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 C3orf33Q6P1S2 294 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 AHSA2Q719I0 299 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 NANOGNBQ7Z5D8 188 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 LNX2Q8N448 690 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 RORBQ92753 470 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR5B2Q96R09 309 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR11A1Q9GZK7 315 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 MEPEQ9NQ76 525 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF229Q9UJW7 825 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 OSGIN1Q9UJX0 560 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 SIGLEC7Q9Y286 467 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 PCDHGB1Q9Y5G3 927 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 TRRAPQ9Y4A5 3859 aa15.24■□□□□ 0.03
TRAPPC3-209ENST00000616395 TRIM77I1YAP6 450 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 CDC42EP2O14613 210 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 PRODHO43272 600 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR6A2O95222 327 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 CH25HO95992 272 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 JUNBP17275 347 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 GIFP27352 417 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 FOXG1P55316 489 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 TMED1Q13445 227 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 GABRA6Q16445 453 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 DPY19L2P2Q6ZN68 376 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 SPARTQ8N0X7 666 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 IQCF1Q8N6M8 205 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 WDR31Q8NA23 367 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR13C2Q8NGS9 318 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 OR51A7Q8NH64 312 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 APH1BQ8WW43 257 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 DGCR14Q96DF8 476 aaKnown RBP15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 LRR1Q96L50 414 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 TAPBPLQ9BX59 468 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 ASPNQ9BXN1 380 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 PCDHB10Q9UN67 800 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 MOKQ9UQ07 419 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 ARFGEF3Q5TH69 2177 aa15.23■□□□□ 0.03
TRAPPC3-209ENST00000616395 PRR23D1E9PI22 279 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 SURF4O15260 269 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF208O43345 1280 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 PTP4A3O75365 173 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 CDK1P06493 297 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 PRR23D2P0DMB1 279 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 TFPIP10646 304 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 GABRB1P18505 474 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 PCMT1P22061 227 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 ALDH3B2P48448 385 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 HILS1P60008 231 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF74Q16587 644 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 FAM69AQ5T7M9 428 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 ACSM5Q6NUN0 579 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms