RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 OR6C65A6NJZ3 312 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 C11orf98E9PRG8 122 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 BLOC1S5-TXNDC5H3BN57 136 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 RNF13O43567 381 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 AKAP8O43823 692 aaKnown RBP17.27■□□□□ 0.36
LSM4-203ENST00000593829 PPP3CBP16298 524 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 SELENOPP49908 381 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 FAPQ12884 760 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 TSPO2Q5TGU0 170 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 ZNF770Q6IQ21 691 aaPredicted RBP17.27■□□□□ 0.36
LSM4-203ENST00000593829 PODNL1Q6PEZ8 512 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 PTCHD4Q6ZW05 846 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 ANKK1Q8NFD2 765 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 OR52J3Q8NH60 311 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 KISS1RQ969F8 398 aaPredicted RBP17.27■□□□□ 0.36
LSM4-203ENST00000593829 C14orf79Q96F83 325 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 RNF170Q96K19 258 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 BARHL1Q9BZE3 327 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 SLC7A10Q9NS82 523 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 DDX28Q9NUL7 540 aaKnown RBP17.27■□□□□ 0.36
LSM4-203ENST00000593829 TAS2R16Q9NYV7 291 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 STUB1Q9UNE7 303 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 FREM1Q5H8C1 2179 aa17.27■□□□□ 0.36
LSM4-203ENST00000593829 ALX3O95076 343 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 GADD45GO95257 159 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 IL7P13232 177 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 IGHV1-2P23083 117 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 IL32P24001 234 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 RPS19P39019 145 aaKnown RBP17.27■□□□□ 0.35
LSM4-203ENST00000593829 MRPS15P82914 257 aaKnown RBP17.27■□□□□ 0.35
LSM4-203ENST00000593829 ZNF79Q15937 498 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 KLHL17Q6TDP4 642 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 GRPEL2Q8TAA5 225 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 ACTR6Q9GZN1 396 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 SLC22A4Q9H015 551 aa17.27■□□□□ 0.35
LSM4-203ENST00000593829 CENPEQ02224 2701 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 UNC79Q9P2D8 2635 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 TRBV4-1A0A0J9YWV2 114 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 MEIOCA2RUB1 952 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 SERPINI2O75830 405 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 LYZL6O75951 148 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 ZNF432O94892 652 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 SAGP10523 405 aaPredicted RBP17.26■□□□□ 0.35
LSM4-203ENST00000593829 COX5AP20674 150 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 MAKP20794 623 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 PSMA1P25786 263 aaKnown RBP17.26■□□□□ 0.35
LSM4-203ENST00000593829 SSTR2P30874 369 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 CRYBB2P43320 205 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 SCN1BQ07699 218 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 NHLRC1Q6VVB1 395 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 BHLHA15Q7RTS1 189 aaPredicted RBP17.26■□□□□ 0.35
LSM4-203ENST00000593829 RDH10Q8IZV5 341 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 NEDD4LQ96PU5 975 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 MARCH7Q9H992 704 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 NDUFB11Q9NX14 153 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 CMAHPQ9Y471 501 aa17.26■□□□□ 0.35
LSM4-203ENST00000593829 ANKHD1Q8IWZ3 2542 aaKnown RBP17.26■□□□□ 0.35
LSM4-203ENST00000593829 FAM25AB3EWG3 89 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 FAM25CB3EWG5 89 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 FAM25GB3EWG6 89 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 CASKO14936 926 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 SLC43A1O75387 559 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 KRT33AO76009 404 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 RUNX1T1Q06455 604 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 RPL18Q07020 188 aaKnown RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 MLLT11Q13015 90 aaPredicted RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 DAZAP2Q15038 168 aaPredicted RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 SPHARQ15513 63 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TSC22D1Q15714 1073 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 AQP11Q8NBQ7 271 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 PROKR2Q8NFJ6 384 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 SLC7A6Q92536 515 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TRIM63Q969Q1 353 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TMEM80Q96HE8 168 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 USB1Q9BQ65 265 aaKnown RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 MND1Q9BWT6 205 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TMEM5Q9Y2B1 443 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 IL1AP01583 271 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TSPAN19P0C672 248 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 PRF1P14222 555 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 AQP2P41181 271 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 DOC2BQ14184 412 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TBRG1Q3YBR2 411 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 C12orf73Q69YU5 71 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 TMPRSS11FQ6ZWK6 438 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 ABHD12BQ7Z5M8 362 aaPredicted RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 MEX3DQ86XN8 651 aaKnown RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 ZNF433Q8N7K0 673 aaPredicted RBP17.25■□□□□ 0.35
LSM4-203ENST00000593829 CLDN22Q8N7P3 220 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 GDPD1Q8N9F7 314 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 S100PBPQ96BU1 408 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 OR2M2Q96R28 347 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 FUZQ9BT04 418 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 EMC6Q9BV81 110 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 LINC00470Q9BZP3 86 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 MED29Q9NX70 200 aa17.25■□□□□ 0.35
LSM4-203ENST00000593829 ZNF726A6NNF4 738 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 OSMP13725 252 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 IFNGR1P15260 489 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 SLC9A3P48764 834 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms