RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-241	ENST00000593048	RDH5	Q92781	318 aa		13.86	□□□□□ -0.19
CIRBP-241	ENST00000593048	SEPHS2	Q99611	448 aa		13.86	□□□□□ -0.19
CIRBP-241	ENST00000593048	TAAR3P	Q9P1P4	343 aa		13.86	□□□□□ -0.19
CIRBP-241	ENST00000593048	MYEF2	Q9P2K5	600 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-241	ENST00000593048	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-241	ENST00000593048	CST1	P01037	141 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	IGF2	P01344	180 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	HPX	P02790	462 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	SEMG1	P04279	462 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	THRB	P10828	461 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	ACHE	P22303	614 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	CCNO	P22674	350 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	APLNR	P35414	380 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	SRP14	P37108	136 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	KLF3	P57682	345 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	CD47	Q08722	323 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	ST3GAL3	Q11203	375 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	LAPTM4A	Q15012	233 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	RFX4	Q33E94	735 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	TMEM154	Q6P9G4	183 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	ZDHHC13	Q8IUH4	622 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	MOSPD2	Q8NHP6	518 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	SYNPR	Q8TBG9	265 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	SNX33	Q8WV41	574 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	MRPL13	Q9BYD1	178 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	BCL2L14	Q9BZR8	327 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	NARFL	Q9H6Q4	476 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	CCNB1IP1	Q9NPC3	277 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	BATF3	Q9NR55	127 aa		13.85	□□□□□ -0.19
CIRBP-241	ENST00000593048	PPIH	O43447	177 aa	Known RBP	13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	SLC2A10	O95528	541 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	CLPTM1	O96005	669 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	FABP3	P05413	133 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	NR2C1	P13056	603 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	PCMT1	P22061	227 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	CDH15	P55291	814 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	TOP3A	Q13472	1001 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	SGCA	Q16586	387 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	MOG	Q16653	247 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	ALG10	Q5BKT4	473 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	AMIGO2	Q86SJ2	522 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	ZDHHC21	Q8IVQ6	265 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	OR5K1	Q8NHB7	308 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	ZNF519	Q8TB69	540 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	LIPH	Q8WWY8	451 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	NSMAF	Q92636	917 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	TXNIP	Q9H3M7	391 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	SIAE	Q9HAT2	523 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	SLCO1C1	Q9NYB5	712 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048	USE1	Q9NZ43	259 aa		13.84	□□□□□ -0.19
CIRBP-241	ENST00000593048		B4DSR2	109 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	GNGT2	O14610	69 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	TPD52L2	O43399	206 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	PIP5K1C	O60331	668 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	SNAP29	O95721	258 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	SAG	P10523	405 aa	Predicted RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	IFI30	P13284	250 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	CDA	P32320	146 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	GUCA1A	P43080	201 aa	Predicted RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	RPS6KA3	P51812	740 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	AQP4	P55087	323 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	UCP2	P55851	309 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	TMEM33	P57088	247 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	ERVS71-1	P61550	626 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	LRRC36	Q1X8D7	754 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	KRTAP24-1	Q3LI83	254 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	IFI44L	Q53G44	452 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	C10orf128	Q5T292	105 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	ARMC4	Q5T2S8	1044 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	LIPN	Q5VXI9	398 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	GEMIN6	Q8WXD5	167 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	HDAC2	Q92769	488 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	BPIFA2	Q96DR5	249 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	PRRC1	Q96M27	445 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	RBP7	Q96R05	134 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	CIB1	Q99828	191 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	RBM4B	Q9BQ04	359 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	FNDC11	Q9BVV2	318 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	RBM4	Q9BWF3	364 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	SEMA6A	Q9H2E6	1030 aa		13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	HINT3	Q9NQE9	182 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	EIF3K	Q9UBQ5	218 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-241	ENST00000593048	HTR3E	A5X5Y0	456 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	MAGEA13P	A6NCF6	341 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	C17orf100	A8MU93	164 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048		G3V2T6	193 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048		H0YAE9	185 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	ZNF682	O95780	498 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	MT-ND5	P03915	603 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	ZNF250	P15622	560 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	STOM	P27105	288 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	YAP1	P46937	504 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	ALDH3A2	P51648	485 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	CCL8	P80075	99 aa		13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	MRPS11	P82912	194 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	MRPS34	P82930	218 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	SRSF2	Q01130	221 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-241	ENST00000593048	FMOD	Q06828	376 aa		13.82	□□□□□ -0.2

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