RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SULT1C2O00338 296 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 TOR1AO14656 332 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 EIF4E2O60573 245 aaKnown RBP17.14■□□□□ 0.34
SCARF1-206ENST00000573852 OR6A2O95222 327 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 FREM3P0C091 2139 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 CTLA4P16410 223 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 CD1CP29017 333 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 GALNSP34059 522 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 RPL27P61353 136 aaKnown RBP17.14■□□□□ 0.34
SCARF1-206ENST00000573852 ROM1Q03395 351 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 ZMYND11Q15326 602 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 MOGAT2Q3SYC2 334 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 MARCH3Q86UD3 253 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 BEST3Q8N1M1 668 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 PXT1Q8NFP0 134 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF519Q8TB69 540 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 TCTN2Q96GX1 697 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 SLC25A21Q9BQT8 299 aaPredicted RBP17.14■□□□□ 0.34
SCARF1-206ENST00000573852 AIFM2Q9BRQ8 373 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 PTDSS2Q9BVG9 487 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 MTIF3Q9H2K0 278 aaKnown RBP17.14■□□□□ 0.34
SCARF1-206ENST00000573852 SLCO1B1Q9Y6L6 691 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 THEGLP0DJG4 465 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 MGMTP16455 207 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 IGFBP3P17936 291 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-206ENST00000573852 GABRA4P48169 554 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 FNTBP49356 437 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 ADAM8P78325 824 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 CATSPERDQ86XM0 798 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 FBXW5Q969U6 566 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 SLC46A1Q96NT5 459 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 GAL3ST4Q96RP7 486 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 ABHD6Q9BV23 337 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 EPOPA6NHQ4 379 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF28P17035 718 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 BIKQ13323 160 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-206ENST00000573852 C7orf61Q8IZ16 206 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 SLC25A44Q96H78 314 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-206ENST00000573852 SLC25A32Q9H2D1 315 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 ZC4H2Q9NQZ6 224 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 LANCL2Q9NS86 450 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 CKLFQ9UBR5 152 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 MSRAQ9UJ68 235 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 FARSAQ9Y285 508 aaKnown RBP17.14■□□□□ 0.33
SCARF1-206ENST00000573852 LRP12Q9Y561 859 aa17.14■□□□□ 0.33
SCARF1-206ENST00000573852 OR5H14A6NHG9 310 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 NUDT14O95848 222 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 CD8AP01732 235 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 APOC3P02656 99 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 SLC6A8P48029 635 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 DHRS2Q13268 280 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 EIF2B1Q14232 305 aaKnown RBP17.13■□□□□ 0.33
SCARF1-206ENST00000573852 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 MAMDC2Q7Z304 686 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-206ENST00000573852 OIT3Q8WWZ8 545 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 TSLPQ969D9 159 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 ADIPOR1Q96A54 375 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 CMKLR1Q99788 373 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 SLC6A7Q99884 636 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 PELOQ9BRX2 385 aaKnown RBP17.13■□□□□ 0.33
SCARF1-206ENST00000573852 TMEM106CQ9BVX2 250 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 A0A1B0GTI1 187 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 FRG2CA6NGY1 282 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 MPZL1O95297 269 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 RORAP35398 523 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 RIDAP52758 137 aaKnown RBP17.13■□□□□ 0.33
SCARF1-206ENST00000573852 SPOCK1Q08629 439 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 PMPCAQ10713 525 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 CLVS2Q5SYC1 327 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 TMEM151BQ8IW70 566 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 OR5M8Q8NGP6 311 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 OR13C8Q8NGS7 320 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 FAM174AQ8TBP5 190 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF285Q96NJ3 590 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 SLC38A3Q99624 504 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 SCPEP1Q9HB40 452 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 RASL12Q9NYN1 266 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 KLK13Q9UKR3 277 aa17.13■□□□□ 0.33
SCARF1-206ENST00000573852 THADAQ6YHU6 1953 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 CYB5AP00167 134 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 CD2P06729 351 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 UBBP0CG47 229 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 UBCP0CG48 685 aaKnown RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 LIPCP11150 499 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 RPS27AP62979 156 aaKnown RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 UBA52P62987 128 aaKnown RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 SQSTM1Q13501 440 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 SGCBQ16585 318 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 SCGB2B2Q4G0G5 96 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 KCTD18Q6PI47 426 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 BPIFB2Q8N4F0 458 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 OR10K1Q8NGX5 313 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 EDEM2Q9BV94 578 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 MYOZ1Q9NP98 299 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF736B4DX44 427 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 LDLRAD4O15165 306 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms