RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 BRWD3Q6RI45 1802 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 EPRSP07814 1512 aaKnown RBP2.08□□□□□ -2.08
PALB2-203ENST00000565038 ERICH3Q5RHP9 1530 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 ADAMTS12P58397 1594 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 CLRN2A0PK11 232 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 ZNF850A8MQ14 1090 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 GPR89AB7ZAQ6 455 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 DPM1O60762 260 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 ZNF806P0C7X5 589 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 GPR89BP0CG08 455 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 KITLGP21583 273 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 OPRK1P41145 380 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 AQP2P41181 271 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 TPMTP51580 245 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 GBX2P52951 348 aaPredicted RBP2.08□□□□□ -2.08
PALB2-203ENST00000565038 KCNJ2P63252 427 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 SF3A2Q15428 464 aaKnown RBP2.08□□□□□ -2.08
PALB2-203ENST00000565038 LRRC23Q53EV4 343 aaPredicted RBP2.08□□□□□ -2.08
PALB2-203ENST00000565038 TMEM205Q6UW68 189 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 BHLHA15Q7RTS1 189 aaPredicted RBP2.08□□□□□ -2.08
PALB2-203ENST00000565038 CALHM1Q8IU99 346 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 EID2Q8N6I1 236 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 RHEBL1Q8TAI7 183 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 CXorf40AQ8TE69 158 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 PTPRTO14522 1441 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 ABCC2Q92887 1545 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 ADCY10Q96PN6 1610 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 ZNF816-ZNF321PA0A0X1KG74 233 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 OR52A4PA6NMU1 304 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 A8MUU9 505 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 SURF6O75683 361 aaKnown RBP2.07□□□□□ -2.08
PALB2-203ENST00000565038 CCNE2O96020 404 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 APCSP02743 223 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 IL4P05112 153 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 IFNA8P32881 189 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 HNMTP50135 292 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 YWHAGP61981 247 aaKnown RBP eCLIP2.07□□□□□ -2.08
PALB2-203ENST00000565038 TWF1Q12792 350 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 CHIT1Q13231 466 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 TAF7Q15545 349 aaPredicted RBP2.07□□□□□ -2.08
PALB2-203ENST00000565038 METTL21CQ5VZV1 264 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 FBXW12Q6X9E4 464 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 OR1S2Q8NGQ3 325 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 OR10J6PQ8NGY7 276 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 PLPPR1Q8TBJ4 325 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 TRIM44Q96DX7 344 aaPredicted RBP2.07□□□□□ -2.08
PALB2-203ENST00000565038 SERPINB12Q96P63 405 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 CAMK2N2Q96S95 79 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 TIMM29Q9BSF4 260 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 FAM49BQ9NUQ9 324 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 ING4Q9UNL4 249 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 ST3GAL6Q9Y274 331 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 IKBKGQ9Y6K9 419 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 TUBGCP6Q96RT7 1819 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 FHOD3Q2V2M9 1422 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 ADGRL1O94910 1474 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 KDM5BQ9UGL1 1544 aa2.07□□□□□ -2.08
PALB2-203ENST00000565038 SHROOM2Q13796 1616 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 YIF1AO95070 293 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 CDRT1O95170 752 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 CLIC3O95833 236 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 SERPIND1P05546 499 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 C1GALT1C1LP0DN25 315 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 RAB3BP20337 219 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 DTYMKP23919 212 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 ARFIP1P53367 373 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 MRPS22P82650 360 aaKnown RBP2.06□□□□□ -2.08
PALB2-203ENST00000565038 PIGHQ14442 188 aaPredicted RBP2.06□□□□□ -2.08
PALB2-203ENST00000565038 IRF4Q15306 451 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 TGFBIQ15582 683 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 RAET1LQ5VY80 246 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 ANKRD26P1Q6NSI1 321 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 CALHM3Q86XJ0 350 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 PDIK1LQ8N165 341 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 MS4A15Q8N5U1 240 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 EIF1ADQ8N9N8 165 aaKnown RBP2.06□□□□□ -2.08
PALB2-203ENST00000565038 OR2L3Q8NG85 312 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 OR4K5Q8NGD3 323 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 FLYWCH2Q96CP2 140 aaKnown RBP2.06□□□□□ -2.08
PALB2-203ENST00000565038 DDX19AQ9NUU7 478 aaKnown RBP2.06□□□□□ -2.08
PALB2-203ENST00000565038 TMED5Q9Y3A6 229 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 S4R3C0 116 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 AKNAQ7Z591 1439 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 UHRF1BP1LA0JNW5 1464 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 MAPKBP1O60336 1514 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 WDR97A6NE52 1622 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 BIVM-ERCC5R4GMW8 1640 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 PBRM1Q86U86 1689 aa2.06□□□□□ -2.08
PALB2-203ENST00000565038 TSPOAP1O95153 1857 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 GPR179Q6PRD1 2367 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 A0A0U1RQV1 116 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 ARHGEF35A5YM69 484 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 PRPHP41219 470 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 MXD1Q05195 221 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 THEM4Q5T1C6 240 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 ZFP1Q6P2D0 407 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 CCDC73Q6ZRK6 1079 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms