RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 C1orf198Q9H425 327 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 POLR1DQ9Y2S0 133 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 USF3Q68DE3 2245 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 TMCC2O75069 709 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 GAAP10253 952 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 OSMP13725 252 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 ZNF23P17027 643 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 NR4A1P22736 598 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 THBS4P35443 961 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 NKX6-1P78426 367 aaPredicted RBP19.72■□□□□ 0.75
TDP1-206ENST00000553569 MEP1BQ16820 701 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 C11orf71Q6IPW1 123 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 CPEB3Q8NE35 698 aaKnown RBP19.72■□□□□ 0.75
TDP1-206ENST00000553569 GSX2Q9BZM3 304 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 SEMA6AQ9H2E6 1030 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 OR51B6Q9H340 312 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 KLHL21Q9UJP4 597 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 SPEF1Q9Y4P9 236 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 TIMM10BQ9Y5J6 103 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 FKBP7Q9Y680 259 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 ARID1AO14497 2285 aa19.72■□□□□ 0.75
TDP1-206ENST00000553569 RIIAD1A6NNX1 92 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 OVOL3O00110 214 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 GPRIN2O60269 458 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 IFNGP01579 166 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 OR4A8P0C604 315 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 CCNOP22674 350 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 PYCR1P32322 319 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 ATP5J2P56134 94 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 CRMP1Q14194 572 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 ADIPOQQ15848 244 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 ZNF774Q6NX45 483 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 HIPK1Q86Z02 1210 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 LRRC75A-AS1Q8N1F1 130 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 PROKR2Q8NFJ6 384 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 OR9Q1Q8NGQ5 310 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 OR1J2Q8NGS2 313 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 CACNG6Q9BXT2 260 aa19.71■□□□□ 0.75
TDP1-206ENST00000553569 PAPOLBQ9NRJ5 636 aaKnown RBP19.71■□□□□ 0.75
TDP1-206ENST00000553569 AKAP9Q99996 3911 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 OTOGQ6ZRI0 2925 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 G3V2T6 193 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 HLA-DQA2P01906 255 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 FAM157BP0CG42 384 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 STOMP27105 288 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 GRK5P34947 590 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 SERPINF1P36955 418 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 DAPP51397 102 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 LSM6P62312 80 aaKnown RBP19.7■□□□□ 0.74
TDP1-206ENST00000553569 GLO1Q04760 184 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 SCRN3Q0VDG4 424 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 AQP6Q13520 282 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 GINS1Q14691 196 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 Q5PR19 223 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 ZNF362Q5T0B9 420 aaPredicted RBP19.7■□□□□ 0.74
TDP1-206ENST00000553569 SLC27A4Q6P1M0 643 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 FAHD1Q6P587 224 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 SYT9Q86SS6 491 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 ZBTB46Q86UZ6 589 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 OR10H5Q8NGA6 315 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 DNAJC9Q8WXX5 260 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 ZNF442Q9H7R0 627 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 ZNF701Q9NV72 531 aaPredicted RBP19.7■□□□□ 0.74
TDP1-206ENST00000553569 ASH2LQ9UBL3 628 aa19.7■□□□□ 0.74
TDP1-206ENST00000553569 DOK2O60496 412 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 ZNF3P17036 446 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 GDI2P50395 445 aaKnown RBP19.69■□□□□ 0.74
TDP1-206ENST00000553569 YTHDF3Q7Z739 585 aaKnown RBP19.69■□□□□ 0.74
TDP1-206ENST00000553569 ZDHHC13Q8IUH4 622 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 ALDH16A1Q8IZ83 802 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 ICA1LQ8NDH6 482 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 SLC26A10Q8NG04 563 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 OR51L1Q8NGJ5 315 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 OR2T4Q8NH00 348 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 TRMT61AQ96FX7 289 aaKnown RBP19.69■□□□□ 0.74
TDP1-206ENST00000553569 DDOQ99489 341 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 GRIP2Q9C0E4 1043 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 CMC2Q9NRP2 79 aa19.69■□□□□ 0.74
TDP1-206ENST00000553569 C5orf49A4QMS7 147 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 SAC3D1A6NKF1 404 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 SNAP29O95721 258 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 GYPBP06028 91 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 PAX1P15863 534 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 TEKQ02763 1124 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 KCNMB1Q16558 191 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 ACSM5Q6NUN0 579 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 ZFP1Q6P2D0 407 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 SPNS3Q6ZMD2 512 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 KRTAP1-3Q8IUG1 177 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 SVOPLQ8N434 492 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 OTULINQ96BN8 352 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 CENPNQ96H22 339 aaPredicted RBP19.68■□□□□ 0.74
TDP1-206ENST00000553569 POM121L2Q96KW2 1035 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 PKP2Q99959 881 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 WACQ9BTA9 647 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 RBM4Q9BWF3 364 aaKnown RBP19.68■□□□□ 0.74
TDP1-206ENST00000553569 KRT84Q9NSB2 600 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 CMAHPQ9Y471 501 aa19.68■□□□□ 0.74
TDP1-206ENST00000553569 LOC100509620A0A075B734 347 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 VSTM5A8MXK1 200 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms