RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PNMTP11086 282 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 PNLIPP16233 465 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 PVALBP20472 110 aaPredicted RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 MPZP25189 248 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 PAX6P26367 422 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 CD1CP29017 333 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 DEFA5Q01523 94 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 LTBQ06643 244 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ALKBH1Q13686 389 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 SNTB1Q13884 538 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 GUCA2BQ16661 112 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 PNLIPRP3Q17RR3 467 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 EXOSC6Q5RKV6 272 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 OR5M10Q6IEU7 315 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 STAC2Q6ZMT1 411 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 FAM122BQ7Z309 247 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 COMTD1Q86VU5 262 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ZNF595Q8IYB9 648 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 IZUMO1Q8IYV9 350 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ZNF433Q8N7K0 673 aaPredicted RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 C17orf47Q8NEP4 570 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 OR9A2Q8NGT5 310 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 OR5J2Q8NH18 312 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 SLC37A2Q8TED4 501 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 RNF141Q8WVD5 230 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 NKD1Q969G9 470 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 C16orf58Q96GQ5 468 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 OR14A2Q96R54 314 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 MENTQ9BUN1 341 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 RSPO3Q9BXY4 272 aaPredicted RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 KIR3DX1Q9H7L2 352 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 CHRNA9Q9UGM1 479 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 ATG4BQ9Y4P1 393 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 B3GALT1Q9Y5Z6 326 aa9.41□□□□□ -0.9
CHFR-219ENST00000541341 MDC1Q14676 2089 aaKnown RBP9.41□□□□□ -0.9
CHFR-219ENST00000541341 TRBV5-5A0A0J9YX44 114 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 GGT3PA6NGU5 568 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 E9PI62 339 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 STMND1H3BQB6 276 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 GOSR2O14653 212 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 NKX2-8O15522 239 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 PIP5K1CO60331 668 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 ADAM11O75078 769 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 ZNF254O75437 659 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 KDM4BO94953 1096 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 PET100P0DJ07 73 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 TPT1P13693 172 aaKnown RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 CPMP14384 443 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 MAKP20794 623 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 CDK2P24941 298 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 GSK3AP49840 483 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 RAB13P51153 203 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 HCCSP53701 268 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 RPS11P62280 158 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHFR-219ENST00000541341 SERTAD2Q14140 314 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 INSL4Q14641 139 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 PLEKHN1Q494U1 663 aaPredicted RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 TP53I3Q53FA7 332 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 MRPL2Q5T653 305 aaKnown RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 ATP1A1-AS1Q5TC04 95 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 STEAP1BQ6NZ63 245 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 LRFN4Q6PJG9 635 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 ZNF793Q6ZN11 406 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 PRSS45Q7RTY3 260 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 JAZF1Q86VZ6 243 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 ZDHHC22Q8N966 263 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 LMNTD1Q8N9Z9 388 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 OR4E2Q8NGC2 313 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 OR52E2Q8NGJ4 325 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 STOML3Q8TAV4 291 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 ADAMTS18Q8TE60 1221 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 SAT2Q96F10 170 aaPredicted RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 IL17FQ96PD4 163 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 NUDT16L1Q9BRJ7 211 aaKnown RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 LMF2Q9BU23 707 aaKnown RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 SLC25A18Q9H1K4 315 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 AUNIPQ9H7T9 357 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 C5AR2Q9P296 337 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 CPNE7Q9UBL6 633 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 OR5V1Q9UGF6 321 aa9.4□□□□□ -0.9
CHFR-219ENST00000541341 GPR55Q9Y2T6 319 aaPredicted RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
CHFR-219ENST00000541341 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 LILRA5A6NI73 299 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 F8W036 122 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 DNASE2O00115 360 aaPredicted RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 LCMT2O60294 686 aaKnown RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 PPP1R3DO95685 299 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 CYB5AP00167 134 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 HRGP04196 525 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms