RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 IL17RDQ8NFM7 739 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 RNF128Q8TEB7 428 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 S100ZQ8WXG8 99 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 HAS2Q92819 552 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 SLC25A18Q9H1K4 315 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 NOX4Q9NPH5 578 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 KLHL9Q9P2J3 617 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF281Q9Y2X9 895 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 FLVCR1Q9Y5Y0 555 aa10.87□□□□□ -0.67
AP003559.1-201ENST00000540906 A0A0B4J203 849 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 GJE1A6NN92 205 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 PHYHO14832 338 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 TACSTD2P09758 323 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 UCHL1P09936 223 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 SLC2A2P11168 524 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF823P16415 610 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 THBS2P35442 1172 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 PPIAP62937 165 aaKnown RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 LINGO2Q7L985 606 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 KRT77Q7Z794 578 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ZFP62Q8NB50 900 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ABHD3Q8WU67 409 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ASB17Q8WXJ9 295 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 MRPL48Q96GC5 212 aaKnown RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 KCNN2Q9H2S1 579 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 GLTPQ9NZD2 209 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 CYB5R1Q9UHQ9 305 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 FOXD3Q9UJU5 478 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 KLF13Q9Y2Y9 288 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 V9GYH0 126 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 RGS5O15539 181 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNHIT1O43257 154 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 TLX3O43711 291 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 HPGDSO60760 199 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 HRGP04196 525 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 S100A5P33763 92 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ETV6P41212 452 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 SOX2P48431 317 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 TNFSF10P50591 281 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ASB18Q6ZVZ8 466 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 TEX19Q8NA77 164 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 DERL3Q96Q80 235 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 SLC30A2Q9BRI3 323 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 COMMD3Q9UBI1 195 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 B4GALT7Q9UBV7 327 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 CMAHPQ9Y471 501 aa10.86□□□□□ -0.67
AP003559.1-201ENST00000540906 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 CENPBD1B2RD01 187 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF879B4DU55 563 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 DNPH1O43598 174 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 GPRIN2O60269 458 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 AQP8O94778 261 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 VAMP5O95183 116 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 CD46P15529 392 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF708P17019 499 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF79Q15937 498 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 FDX2Q6P4F2 183 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 C20orf196Q8IYI0 205 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 OR6N1Q8NGY5 312 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 OR5AK2Q8NH90 309 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 RNF133Q8WVZ7 376 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 NABP1Q96AH0 204 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 SLAMF6Q96DU3 332 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 MROQ9BYG7 248 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 POLE4Q9NR33 117 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 CENPMQ9NSP4 180 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 GDF2Q9UK05 429 aaPredicted RBP10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 AK6Q9Y3D8 172 aaKnown RBP10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 NCOA6Q14686 2063 aaPredicted RBP10.85□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF891A8MT65 544 aaPredicted RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 KLRC4-KLRK1H3BQV0 150 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 RER1O15258 196 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 MAGEB3O15480 346 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 TBX1O43435 398 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 PAHP00439 452 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 RIDAP52758 137 aaKnown RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 PPP5CP53041 499 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 YIF1BQ5BJH7 314 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 C10orf128Q5T292 105 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 IDNKQ5T6J7 187 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 SFXN4Q6P4A7 337 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 IGFL2Q6UWQ7 119 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms