RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 TP53I11O14683 189 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 RGS13O14921 159 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 CLDN12P56749 244 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 GNG2P59768 71 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 ZFP69Q49AA0 526 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 MDGA2Q7Z553 956 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 LIX1LQ8IVB5 337 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 SYNPRQ8TBG9 265 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
RTN3-210ENST00000540798 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
RTN3-210ENST00000540798 C7orf66A4D0T2 115 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 ISG15P05161 165 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 ZNF883P0CG24 379 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 FSTP19883 344 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 EIF1P41567 113 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 IZUMO1Q8IYV9 350 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 TMEM105Q8N8V8 129 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 DNAAF1Q8NEP3 725 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 C5orf34Q96MH7 638 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 ANGPTL4Q9BY76 406 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 DPAGT1Q9H3H5 408 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 AUNIPQ9H7T9 357 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 PROK2Q9HC23 129 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 G6PC2Q9NQR9 355 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 FRYLO94915 3013 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 LOC102725191A0A1B0GVB3 256 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 C9J4A7 227 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 IGFBP3P17936 291 aaPredicted RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 RPS15P62841 145 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 FOXK1P85037 733 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 KRT74Q7RTS7 529 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 S100A16Q96FQ6 103 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 CMKLR1Q99788 373 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 TRAF4Q9BUZ4 470 aaPredicted RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 GTPBP2Q9BX10 602 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
RTN3-210ENST00000540798 MRPS7Q9Y2R9 242 aaKnown RBP12.3□□□□□ -0.44
RTN3-210ENST00000540798 TTC28Q96AY4 2481 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 A0A087WZY1 265 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 ANXA2P2A6NMY6 339 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
RTN3-210ENST00000540798 LDOC1O95751 146 aaPredicted RBP12.29□□□□□ -0.44
RTN3-210ENST00000540798 ANXA2P07355 339 aaKnown RBP12.29□□□□□ -0.44
RTN3-210ENST00000540798 GDNFP39905 211 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 ART1P52961 327 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 BIDP55957 195 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
RTN3-210ENST00000540798 OPN5Q6U736 354 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.29□□□□□ -0.44
RTN3-210ENST00000540798 TMPRSS12Q86WS5 348 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 RNF133Q8WVZ7 376 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 PPP1R14AQ96A00 147 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 WDR87Q6ZQQ6 2873 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 TEX51A0A1B0GUA7 166 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 CENPXA8MT69 81 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 H0YC42 278 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 MAS1P04201 325 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 ZNF823P16415 610 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 RAG2P55895 527 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 GPR85P60893 370 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 SLC22A10Q63ZE4 541 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 DCXRQ7Z4W1 244 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 ZNF227Q86WZ6 799 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 GLB1L2Q8IW92 636 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 OR11G2Q8NGC1 345 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 DMRTB1Q96MA1 342 aa12.29□□□□□ -0.44
RTN3-210ENST00000540798 TCRBP04435 133 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 ICAM2P13598 275 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 ODF4Q2M2E3 257 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 PLCZ1Q86YW0 608 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 GTPBP8Q8N3Z3 284 aaPredicted RBP12.28□□□□□ -0.44
RTN3-210ENST00000540798 DTWD2Q8NBA8 298 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 OR4K17Q8NGC6 315 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 PAQR8Q8TEZ7 354 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 TSEN15Q8WW01 171 aaKnown RBP12.28□□□□□ -0.44
RTN3-210ENST00000540798 GHITMQ9H3K2 345 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 PTGES2Q9H7Z7 377 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 SLC39A1Q9NY26 324 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 KCNN3Q9UGI6 736 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 ZNF814B7Z6K7 855 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 CDK2P24941 298 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 HIST3H3Q16695 136 aa12.28□□□□□ -0.44
RTN3-210ENST00000540798 NDUFAF7Q7L592 441 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms