RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SLC25A44Q96H78 314 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-205ENST00000538545 OXGR1Q96P68 337 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RBP7Q96R05 134 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RER1O15258 196 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ZNHIT1O43257 154 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 CXCL13O43927 109 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 KHDRBS3O75525 346 aaKnown RBP12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ITGB2P05107 769 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 HNRNPCP07910 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
ACTN1-205ENST00000538545 CD53P19397 219 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RANBP1P43487 201 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 H3F3AP84243 136 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 Q499Y3 187 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 NOXO1Q8NFA2 376 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 SFXN2Q96NB2 322 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ARL6IP5O75915 188 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 SERPINA3P01011 423 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 IGHG1P01857 330 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 WT1P19544 449 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 FOXO1Q12778 655 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 EIF3IQ13347 325 aaKnown RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 PRSS45Q7RTY3 260 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF671Q8TAW3 534 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 MRPL48Q96GC5 212 aaKnown RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 ABHD1Q96SE0 405 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 GPR87Q9BY21 358 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 C11orf54Q9H0W9 315 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 NKX2-8O15522 239 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 PRKXP51817 358 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
ACTN1-205ENST00000538545 SLC35A1P78382 337 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 XKRXQ6PP77 449 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 GLB1L2Q8IW92 636 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 RNF128Q8TEB7 428 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 TMEM41AQ96HV5 264 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 LHFPL6Q9Y693 200 aa12.54□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF726A6NNF4 738 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
ACTN1-205ENST00000538545 PLA2G10O15496 165 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 GPRIN2O60269 458 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SRP9P49458 86 aaKnown RBP12.53□□□□□ -0.4
ACTN1-205ENST00000538545 OR1C1Q15619 314 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 C3AR1Q16581 482 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 METAP1DQ6UB28 335 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-205ENST00000538545 KCTD20Q7Z5Y7 419 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 GGNQ86UU5 652 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SLC7A6Q92536 515 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 GAL3ST1Q99999 423 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 NEURL2Q9BR09 285 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 PIGQQ9BRB3 760 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 CCDC32Q9BV29 185 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
ACTN1-205ENST00000538545 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 UGT2A1Q9Y4X1 527 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 C21orf140B9A014 251 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 FZD7O75084 574 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 CD63P08962 238 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 MAGEA5P43359 124 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 RAC1P63000 192 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SGCAQ16586 387 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 TMEM81Q6P7N7 255 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 CREB3L2Q70SY1 520 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 GALNTL5Q7Z4T8 443 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SULF2Q8IWU5 870 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SLAMF6Q96DU3 332 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SNX18Q96RF0 628 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 SOSTQ9BQB4 213 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 WACQ9BTA9 647 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 COMMD4Q9H0A8 199 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 TCF7L1Q9HCS4 588 aa12.53□□□□□ -0.4
ACTN1-205ENST00000538545 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 ANKRD33BA6NCL7 494 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 P2RY10O00398 339 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms