RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 SMIM19Q96E16 107 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 ULBP2Q9BZM5 246 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 BCO1Q9HAY6 547 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 ELOVL3Q9HB03 270 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 CLEC4AQ9UMR7 237 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
PPP1CA-204ENST00000526510 SVILO95425 2214 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 GABRPO00591 440 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 GPR171O14626 319 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 CD53P19397 219 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 FGF9P31371 208 aaPredicted RBP17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 GDI2P50395 445 aaKnown RBP17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 RPUSD3Q6P087 351 aaKnown RBP17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 FAM220AQ7Z4H9 259 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 ZNF679Q8IYX0 411 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 KBTBD8Q8NFY9 601 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 FAM122AQ96E09 287 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 MAP6Q96JE9 813 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 DOCK7Q96N67 2140 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 RBM24Q9BX46 236 aaKnown RBP17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 PRRG4Q9BZD6 226 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 RNF122Q9H9V4 155 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 LUZP4Q9P127 313 aa17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 NOSIPQ9Y314 301 aaKnown RBP17.54■□□□□ 0.4
PPP1CA-204ENST00000526510 CHD8Q9HCK8 2581 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 TRBV2A0A0J9YWF9 115 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 A0A1B0GTH9 108 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 CD8B2A6NJW9 211 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 ZNF724A8MTY0 619 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 HLA-DPB1P04440 258 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 CD8BP10966 210 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 ADGRE4PQ86SQ3 457 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 OR10S1Q8NGN2 331 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 OR13C5Q8NGS8 318 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 SNRNP27Q8WVK2 155 aaKnown RBP17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 CALHM2Q9HA72 323 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 LRP12Q9Y561 859 aa17.53■□□□□ 0.4
PPP1CA-204ENST00000526510 C1QTNF9BB2RNN3 333 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 CD1AP06126 327 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 C1QTNF9P0C862 333 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 PAX7P23759 505 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 UCNP55089 124 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 RNPS1Q15287 305 aaKnown RBP17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 SGCAQ16586 387 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 KCTD18Q6PI47 426 aaPredicted RBP17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 CFAP77Q6ZQR2 320 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 KRT77Q7Z794 578 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 ALKBH3Q96Q83 286 aaPredicted RBP17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 PDCD1LG2Q9BQ51 273 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 CDADC1Q9BWV3 514 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 CRLF2Q9HC73 371 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 EMC3Q9P0I2 261 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 FRRS1LQ9P0K9 344 aa17.52■□□□□ 0.4
PPP1CA-204ENST00000526510 SLC22A20A6NK97 555 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 MRPL33O75394 65 aaKnown RBP17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 SC5DO75845 299 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 RGS9O75916 674 aaPredicted RBP17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 YES1P07947 543 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 GALP22466 123 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 RPS11P62280 158 aaKnown RBP eCLIP17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 TUBA1BP68363 451 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 OR7E24Q6IFN5 339 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 TUBA1AQ71U36 451 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 FGD2Q7Z6J4 655 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 GPR137CQ8N3F9 429 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 ABHD4Q8TB40 342 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 RNF133Q8WVZ7 376 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 ZNF416Q9BWM5 594 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 MROQ9BYG7 248 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 SLIRPQ9GZT3 109 aaKnown RBP17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 CLCF1Q9UBD9 225 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 GDF2Q9UK05 429 aaPredicted RBP17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 ZNF175Q9Y473 711 aa17.52■□□□□ 0.39
PPP1CA-204ENST00000526510 BSNQ9UPA5 3926 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 HSPB2A8KAH6 182 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 TMCC2O75069 709 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 MSR1P21757 451 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 RPS19P39019 145 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 LSM6P62312 80 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 CXADRP78310 365 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 MRPL28Q13084 256 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 ALKBH1Q13686 389 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 ENDOGQ14249 297 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 HSPB2Q16082 182 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 RIPPLY2Q5TAB7 128 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 TSPO2Q5TGU0 170 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 PRSS35Q8N3Z0 413 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 OR2G2Q8NGZ5 317 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 RGP1Q92546 391 aaPredicted RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 SLAMF6Q96DU3 332 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 COQ7Q99807 217 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 PPIL3Q9H2H8 161 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 NELFAQ9H3P2 528 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 GPR35Q9HC97 309 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 ASH2LQ9UBL3 628 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 FBXL3Q9UKT7 428 aa17.51■□□□□ 0.39
PPP1CA-204ENST00000526510 SHISA3A0PJX4 238 aa17.5■□□□□ 0.39
PPP1CA-204ENST00000526510 SRSF10O75494 262 aaKnown RBP17.5■□□□□ 0.39
PPP1CA-204ENST00000526510 ZFPL1O95159 310 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms