RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 MRPL18Q9H0U6 180 aaKnown RBP8.81□□□□□ -1
TRIM35-204ENST00000521283 MAGIXQ9H6Y5 334 aa8.81□□□□□ -1
TRIM35-204ENST00000521283 CDH20Q9HBT6 801 aa8.81□□□□□ -1
TRIM35-204ENST00000521283 ZNF224Q9NZL3 707 aa8.81□□□□□ -1
TRIM35-204ENST00000521283 EIF3KQ9UBQ5 218 aaKnown RBP8.81□□□□□ -1
TRIM35-204ENST00000521283 TIMM10BQ9Y5J6 103 aa8.81□□□□□ -1
TRIM35-204ENST00000521283 TLN2Q9Y4G6 2542 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 TRAV27A0A087WT01 109 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 H3BSA7 217 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 hCG_2039718K7EN88 272 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 ARPC2O15144 300 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SYNGR3O43761 229 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 IDH3BO43837 385 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 PTP4A3O75365 173 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SEC14L2O76054 403 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 LY6G6DO95868 133 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 MT-ND5P03915 603 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 CELA3BP08861 270 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 CST2P09228 141 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 ANPEPP15144 967 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 CRABP1P29762 137 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SDHAP31040 664 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 THBS4P35443 961 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 LOXL1Q08397 574 aaPredicted RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 TRIM25Q14258 630 aaKnown RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 RAB39AQ14964 217 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 DNM1P34Q6PK57 102 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SLC25A47Q6Q0C1 308 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 RNF148Q8N7C7 305 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 ZNF519Q8TB69 540 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 C11orf40Q8WZ69 217 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 HDAC2Q92769 488 aaKnown RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 MRPL24Q96A35 216 aaKnown RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 NMD3Q96D46 503 aaKnown RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 COG8Q96MW5 612 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 ZNF570Q96NI8 536 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SNX18Q96RF0 628 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 VRK1Q99986 396 aaPredicted RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 PIMREGQ9BSJ6 248 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 S100A14Q9HCY8 104 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SRA1Q9HD15 236 aaKnown RBP8.8□□□□□ -1
TRIM35-204ENST00000521283 DYNLRB1Q9NP97 96 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 NRIP3Q9NQ35 241 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SLCO1C1Q9NYB5 712 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 SIGLEC7Q9Y286 467 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 CSPG4Q6UVK1 2322 aa8.8□□□□□ -1
TRIM35-204ENST00000521283 PRSS37A4D1T9 235 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ZNF503-AS2A6NEH8 195 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 M0R233 179 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SMAD7O15105 426 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 PIP5K1CO60331 668 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ICMTO60725 284 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 TXNDC12O95881 172 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SEMG1P04279 462 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 MMP7P09237 267 aaPredicted RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 COX5BP10606 129 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 MSR1P21757 451 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 FPR3P25089 353 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 RRM2P31350 389 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 LIPAP38571 399 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 GPR4P46093 362 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 OMPP47874 163 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 LIMS1P48059 325 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 HMGA2P52926 109 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 UCP2P55851 309 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 LSM6P62312 80 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 MRPS11P82912 194 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 MYBPC1Q00872 1141 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SPIBQ01892 262 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 RUNX1T1Q06455 604 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 TOP3AQ13472 1001 aaPredicted RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 FHL1Q13642 323 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SGCAQ16586 387 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 KRT80Q6KB66 452 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 RGS7BPQ6MZT1 257 aaPredicted RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 VHLLQ6RSH7 139 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 TBPL2Q6SJ96 375 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SMARCD3Q6STE5 483 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 FAM122BQ7Z309 247 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 DHFR2Q86XF0 187 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ZDHHC21Q8IVQ6 265 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 OR13C2Q8NGS9 318 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 C10orf105Q8TEF2 133 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ASB9Q96DX5 294 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 DUS3LQ96G46 650 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 FAM46AQ96IP4 442 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 SH3GL3Q99963 347 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 GSX1Q9H4S2 264 aaPredicted RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 SEC61A2Q9H9S3 476 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ELOVL3Q9HB03 270 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 CGGBP1Q9UFW8 167 aaPredicted RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 NDRG4Q9ULP0 352 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 CHD3Q12873 2000 aaKnown RBP8.79□□□□□ -1
TRIM35-204ENST00000521283 NF1P21359 2839 aa8.79□□□□□ -1
TRIM35-204ENST00000521283 ABCA1O95477 2261 aa8.78□□□□□ -1
TRIM35-204ENST00000521283 UNC119BA6NIH7 251 aa8.78□□□□□ -1
TRIM35-204ENST00000521283 CDC42EP2O14613 210 aa8.78□□□□□ -1
TRIM35-204ENST00000521283 ARPC3O15145 178 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms