RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C12orf45Q8N5I9 185 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 STT3BQ8TCJ2 826 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 SEC22AQ96IW7 307 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 STACQ99469 402 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 PAPOLGQ9BWT3 736 aaKnown RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR11A1Q9GZK7 315 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 EVA1AQ9H8M9 152 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 C20orf141Q9NUB4 165 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CDK2P24941 298 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 GPR85P60893 370 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 GLYATL3Q5SZD4 288 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 MKXQ8IYA7 352 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR10K1Q8NGX5 313 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF285Q96NJ3 590 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 PRRT1Q99946 306 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 NICN1Q9BSH3 213 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 KLHL13Q9P2N7 655 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 BOKQ9UMX3 212 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 SIRT4Q9Y6E7 314 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ALPK2Q86TB3 2170 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CACNA1EQ15878 2313 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 TSPAN11A1L157 253 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ANKRD30BLA7E2S9 258 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 PLRG1O43660 514 aaKnown RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 HIST1H1CP16403 213 aaKnown RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 HTR2CP28335 458 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 DCTDP32321 178 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CYCSP99999 105 aaKnown RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 MFAP5Q13361 173 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 FGL2Q14314 439 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 SLC9A3R2Q15599 337 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 SLC36A2Q495M3 483 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CDONQ4KMG0 1287 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 LAMTOR1Q6IAA8 161 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CMTM1Q8IZ96 169 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR4D9Q8NGE8 314 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 CCDC74AQ96AQ1 378 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 MRGPRX3Q96LB0 322 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 SORCS2Q96PQ0 1159 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF416Q9BWM5 594 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 TEX101Q9BY14 249 aa9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 TCEAL2Q9H3H9 227 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 COA3Q9Y2R0 106 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA1-202ENST00000517417 TRAV1-2A0A0B4J238 106 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 A0A1W2PPC4 97 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 A0A1W2PS29 197 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 PRAMEF27A3QJZ7 478 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 C7orf66A4D0T2 115 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SULT1B1O43704 296 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 HYAL3O43820 417 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 PAPLNO95428 1278 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 FCGR2AP12318 317 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 ICAM2P13598 275 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 GCH1P30793 250 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 DLSTP36957 453 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 TAS2R19P59542 299 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 DUSP8Q13202 625 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 DCXRQ7Z4W1 244 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 ADGRG3Q86Y34 549 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR52B4Q8NGK2 314 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 CPT1CQ8TCG5 803 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 DVL3Q92997 716 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 FGGYQ96C11 551 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SMIM3Q9BZL3 60 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 RGCCQ9H4X1 137 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 EHFQ9NZC4 300 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 DNAJB11Q9UBS4 358 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 IFITM5A6NNB3 132 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 HSPB6O14558 160 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 PTHLHP12272 177 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 CAMLGP49069 296 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SMAD4Q13485 552 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 ALKBH1Q13686 389 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 LINC00303Q3SY05 128 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 RPS19BP1Q86WX3 136 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 STEAP2Q8NFT2 490 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 FOXRED1Q96CU9 486 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 C1QTNF6Q9BXI9 259 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 GHITMQ9H3K2 345 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 CALHM2Q9HA72 323 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SCN10AQ9Y5Y9 1956 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SHISA3A0PJX4 238 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 AIPO00170 330 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 HPXP02790 462 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 THBS1P07996 1170 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 UBBP0CG47 229 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 UBCP0CG48 685 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 RRASP10301 218 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZP3P21754 424 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 CLDN6P56747 220 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 RPS27AP62979 156 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 UBA52P62987 128 aaKnown RBP9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 RAB11FIP2Q7L804 512 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 SULF2Q8IWU5 870 aa9.86□□□□□ -0.83
PCDHGA1-202ENST00000517417 BCORP1Q8N888 145 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms