RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SPOCK1Q08629 439 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 PLA2G7Q13093 441 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 KIAA0040Q15053 153 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 C5orf46Q6UWT4 87 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 KCNRGQ8N5I3 272 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 TMEM99Q8N816 258 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 FAM212BQ9NTI7 297 aaPredicted RBP12□□□□□ -0.49
TCOF1-213ENST00000514442 SLC6A14Q9UN76 642 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 MMACHCQ9Y4U1 282 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 LSM5Q9Y4Y9 91 aaKnown RBP12□□□□□ -0.49
TCOF1-213ENST00000514442 TMEM269A0A1B0GVZ9 245 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 OR2W5A6NFC9 320 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 KCNJ3P48549 501 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 SSR4P51571 173 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 EBPQ15125 230 aaKnown RBP12□□□□□ -0.49
TCOF1-213ENST00000514442 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 TMED6Q8WW62 240 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF587Q96SQ5 575 aaPredicted RBP12□□□□□ -0.49
TCOF1-213ENST00000514442 FN3KRPQ9HA64 309 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 CDH20Q9HBT6 801 aa12□□□□□ -0.49
TCOF1-213ENST00000514442 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ALOX12BO75342 701 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 IGHG1P01857 330 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CALCBP10092 127 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CDK2P24941 298 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FASLGP48023 281 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CCR5P51681 352 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FOXK2Q01167 660 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 OR51T1Q8NGJ9 327 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 SCN4AP35499 1836 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FAM230AA0A1W2PPH8 454 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 TMEM218A2RU14 115 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CCSO14618 274 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 NUDT21O43809 227 aaKnown RBP11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FCMRO60667 390 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CRYBA1P05813 215 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 NMBP08949 121 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 MAKP20794 623 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ECH1Q13011 328 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 MANEAQ5SRI9 462 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 C15orf54Q8N8G6 183 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FAM181AQ8N9Y4 354 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ALG12Q9BV10 488 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 HCAR1Q9BXC0 346 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
TCOF1-213ENST00000514442 A0A087WZY1 265 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 A6NJ64 397 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CYTIPO60759 359 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CPN1P15169 458 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CALCRP30988 508 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CD80P33681 288 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 RGS7BPQ6MZT1 257 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-213ENST00000514442 SLC16A9Q7RTY1 509 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 COMTD1Q86VU5 262 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 OR5M9Q8NGP3 310 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 TSLPQ969D9 159 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 LINC00615Q96LM1 132 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CHST8Q9H2A9 424 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CHRDQ9H2X0 955 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ZFP64Q9NPA5 681 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FOCADQ5VW36 1801 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 OR2T7P0C7T2 308 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 PAX6P26367 422 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 TRHRP34981 398 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CLDN17P56750 224 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 TCTN3Q6NUS6 607 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 CNEP1R1Q8N9A8 125 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 OR2T27Q8NH04 317 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 RASD2Q96D21 266 aa11.99□□□□□ -0.49
TCOF1-213ENST00000514442 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 TCN2P20062 427 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 SDHBP21912 280 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 MSX1P28360 303 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 ZFP36L2P47974 494 aaKnown RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 IDH3GP51553 393 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 TAS2R20P59543 309 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF626Q68DY1 528 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 SDF2Q99470 211 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 ISG20L2Q9H9L3 353 aaKnown RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 WASF3Q9UPY6 502 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 SLC17A4Q9Y2C5 497 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 OR2C1O95371 312 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 CD160O95971 181 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 HSD17B7P56937 341 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 RPL19P84098 196 aaKnown RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 NHLRC1Q6VVB1 395 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 RNF165Q6ZSG1 346 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 IFI44Q8TCB0 444 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 C19orf53Q9UNZ5 99 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms