RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AQP4P55087 323 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 PIGFQ07326 219 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 DAZAP2Q15038 168 aaPredicted RBP17.53■□□□□ 0.4
USP53-203ENST00000507597 TEX30Q5JUR7 227 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 IZUMO2Q6UXV1 221 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 OR51L1Q8NGJ5 315 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 RHOXF1Q8NHV9 184 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 MYCBPQ99417 103 aaPredicted RBP17.53■□□□□ 0.4
USP53-203ENST00000507597 ZNF416Q9BWM5 594 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 B3GNT2Q9NY97 397 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 TMEM14AQ9Y6G1 99 aa17.53■□□□□ 0.4
USP53-203ENST00000507597 HCFC1P51610 2035 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 FLNCQ14315 2725 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 CLUP10909 449 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 HTR1FP30939 366 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.52■□□□□ 0.4
USP53-203ENST00000507597 ENTHD1Q8IYW4 607 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 TFAP2CQ92754 450 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 FOXN4Q96NZ1 517 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 MNTQ99583 582 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 HCAR1Q9BXC0 346 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 EMC7Q9NPA0 242 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 RASSF1Q9NS23 344 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 HAO2Q9NYQ3 351 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 CRNNQ9UBG3 495 aaPredicted RBP17.52■□□□□ 0.4
USP53-203ENST00000507597 RAB26Q9ULW5 256 aa17.52■□□□□ 0.4
USP53-203ENST00000507597 CACNA1CQ13936 2221 aa17.52■□□□□ 0.39
USP53-203ENST00000507597 SPTBN1Q01082 2364 aaKnown RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 A0A1W2PR80 420 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 M0R1B8 84 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 IGKV3-15P01624 115 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 TFP02787 698 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 SERPINA5P05154 406 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 THBDP07204 575 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 ZNF32P17041 273 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 APLNRP35414 380 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 SNTB1Q13884 538 aaKnown RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 ENDOGQ14249 297 aaKnown RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 MDP1Q86V88 176 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 ERI1Q8IV48 349 aaKnown RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 ZNF454Q8N9F8 522 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 ZNF511Q8NB15 262 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 OR6N2Q8NGY6 317 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 IPCEF1Q8WWN9 437 aaPredicted RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 ZMYND19Q96E35 227 aaPredicted RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 ZNF582Q96NG8 517 aaPredicted RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 PLEK2Q9NYT0 353 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 ASH2LQ9UBL3 628 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 RPL36Q9Y3U8 105 aaKnown RBP17.51■□□□□ 0.39
USP53-203ENST00000507597 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
USP53-203ENST00000507597 TVP23AA6NH52 213 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 PHYHO14832 338 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 SGCEO43556 437 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 MPZL1O95297 269 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 CRYAAP02489 173 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 COX5BP10606 129 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 SLC2A5P22732 501 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 ZNF83P51522 516 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 TUBA1BP68363 451 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 TUBA4AP68366 448 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 ECH1Q13011 328 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 TBC1D28Q2M2D7 210 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 LINC01590Q5TEZ4 76 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 ARL9Q6T311 187 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 TUBA1AQ71U36 451 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 THAP5Q7Z6K1 395 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 BBS1Q8NFJ9 593 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 FBXO17Q96EF6 278 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 CNN2Q99439 309 aaKnown RBP17.5■□□□□ 0.39
USP53-203ENST00000507597 YIPF3Q9GZM5 350 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 MRPL22Q9NWU5 206 aaKnown RBP17.5■□□□□ 0.39
USP53-203ENST00000507597 DNAJC27Q9NZQ0 273 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 CYB5R1Q9UHQ9 305 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 ATPIF1Q9UII2 106 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 SPEF1Q9Y4P9 236 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 COMMD3-BMI1R4GMX3 469 aa17.5■□□□□ 0.39
USP53-203ENST00000507597 USP9XQ93008 2570 aaPredicted RBP17.49■□□□□ 0.39
USP53-203ENST00000507597 IRGMA1A4Y4 181 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 M0R129 80 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 CD3EP07766 207 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 MMP7P09237 267 aaPredicted RBP17.49■□□□□ 0.39
USP53-203ENST00000507597 SPARCP09486 303 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 IDH3GP51553 393 aaPredicted RBP17.49■□□□□ 0.39
USP53-203ENST00000507597 NUDT6P53370 316 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 CSNK2BP67870 215 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 GGTLC2Q14390 218 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 MEP1BQ16820 701 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 SLC18B1Q6NT16 456 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 UGT2A3Q6UWM9 527 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 SLC16A9Q7RTY1 509 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 ZNF184Q99676 751 aaPredicted RBP17.49■□□□□ 0.39
USP53-203ENST00000507597 C1QTNF6Q9BXI9 259 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 OR2H1Q9GZK4 316 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 HDHD2Q9H0R4 259 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 WDR76Q9H967 626 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms