RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 FBXO17Q96EF6 278 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 ZNF75AQ96N20 296 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 OR2H1Q9GZK4 316 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 NOX3Q9HBY0 568 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 FAIMQ9NVQ4 179 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 NOTCH2Q04721 2471 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 ITPR2Q14571 2701 aa13.89□□□□□ -0.19
SSBP1-214ENST00000498107 SPG11Q96JI7 2443 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 VSTM5A8MXK1 200 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 SHISA9B4DS77 424 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 HS3ST1O14792 307 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PRODHO43272 600 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PLAUP00749 431 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 CELA3BP08861 270 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PYCR1P32322 319 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PSG4Q00888 419 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 GALK2Q01415 458 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 TRIP10Q15642 601 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 TBC1D28Q2M2D7 210 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PABPC1L2AQ5JQF8 200 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PLBD1Q6P4A8 553 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 UGT2A3Q6UWM9 527 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 CXXC5Q7LFL8 322 aaKnown RBP13.88□□□□□ -0.19
SSBP1-214ENST00000498107 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 GJC3Q8NFK1 279 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 OR2AJ1Q8NGZ0 328 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 RDH12Q96NR8 316 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 UBTD1Q9HAC8 227 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 CDH20Q9HBT6 801 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 CISD1Q9NZ45 108 aaKnown RBP13.88□□□□□ -0.19
SSBP1-214ENST00000498107 ASH2LQ9UBL3 628 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 NDRG4Q9ULP0 352 aaKnown RBP13.88□□□□□ -0.19
SSBP1-214ENST00000498107 ATP23Q9Y6H3 246 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 APCP25054 2843 aa13.88□□□□□ -0.19
SSBP1-214ENST00000498107 PLCE1Q9P212 2302 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 IGHV2OR16-5A0A0B4J2B6 119 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 A0A1W2PPR1 153 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 FAM183AA6NL82 134 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 FAM171A2A8MVW0 826 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 SGCEO43556 437 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 GLCEO94923 617 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 MPZL1O95297 269 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 SCG5P05408 212 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 COX5BP10606 129 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 KRTAP10-9P60411 292 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 CDC42P60953 191 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 ADAM8P78325 824 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 SLC35D3Q5M8T2 416 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 CPOQ8IVL8 374 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 PACRGLQ8N7B6 248 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 ZNF611Q8N823 705 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 OR6K6Q8NGW6 343 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 PTP4A1Q93096 173 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 OR51V1Q9H2C8 321 aa13.87□□□□□ -0.19
SSBP1-214ENST00000498107 H2AFY2Q9P0M6 372 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-214ENST00000498107 AKAP6Q13023 2319 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 SNAP29O95721 258 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 TFP02787 698 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 GYPBP06028 91 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 STOMP27105 288 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 EPHA2P29317 976 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
SSBP1-214ENST00000498107 SPOCK1Q08629 439 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 KLHL12Q53G59 568 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 LCN1P1Q5VSP4 162 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 ZNF544Q6NX49 715 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 ARL9Q6T311 187 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 PAMR1Q6UXH9 720 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-214ENST00000498107 ZNF584Q8IVC4 421 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 OR51L1Q8NGJ5 315 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 OR8J1Q8NGP2 316 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 TMEM163Q8TC26 289 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 TRUB1Q8WWH5 349 aaKnown RBP13.86□□□□□ -0.19
SSBP1-214ENST00000498107 HRASLS5Q96KN8 279 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 SLC29A1Q99808 456 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 DHRS9Q9BPW9 319 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 GRIP2Q9C0E4 1043 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 WNT5BQ9H1J7 359 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 VCXQ9H320 206 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 MED20Q9H944 212 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 HINT3Q9NQE9 182 aaKnown RBP13.86□□□□□ -0.19
SSBP1-214ENST00000498107 PLEK2Q9NYT0 353 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 ATPIF1Q9UII2 106 aa13.86□□□□□ -0.19
SSBP1-214ENST00000498107 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-214ENST00000498107 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-214ENST00000498107 DOK2O60496 412 aa13.85□□□□□ -0.19
SSBP1-214ENST00000498107 GPANK1O95872 356 aa13.85□□□□□ -0.19
SSBP1-214ENST00000498107 RAF1P04049 648 aa13.85□□□□□ -0.19
SSBP1-214ENST00000498107 CLUP10909 449 aa13.85□□□□□ -0.19
SSBP1-214ENST00000498107 ZNF35P13682 527 aa13.85□□□□□ -0.19
SSBP1-214ENST00000498107 DNASE1P24855 282 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms