RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 THEM6Q8WUY1 208 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 LIPHQ8WWY8 451 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 ASB10Q8WXI3 467 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 RPL3LQ92901 407 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 GCDHQ92947 438 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 MUL1Q969V5 352 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 MIB2Q96AX9 1013 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 SCMH1Q96GD3 660 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 ZNF385AQ96PM9 386 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 CNN2Q99439 309 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 CHCHD6Q9BRQ6 235 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 DCUN1D5Q9BTE7 237 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 ALG8Q9BVK2 526 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 FUNDC2Q9BWH2 189 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 RACGAP1Q9H0H5 632 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 RNF167Q9H6Y7 350 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 WDR76Q9H967 626 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 CALHM2Q9HA72 323 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 ADGRL4Q9HBW9 690 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 EMC7Q9NPA0 242 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 EXOSC4Q9NPD3 245 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 CNOT2Q9NZN8 540 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 B3GAT1Q9P2W7 334 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 SPRR3Q9UBC9 169 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 GNG8Q9UK08 70 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 DIMT1Q9UNQ2 313 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 COPS3Q9UNS2 423 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 B9D1Q9UPM9 204 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 TP53TG5Q9Y2B4 290 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 KLHDC2Q9Y2U9 406 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 EXOSC1Q9Y3B2 195 aaKnown RBP4.22□□□□□ -1.73
CMSS1-209ENST00000497345 HDGFL3Q9Y3E1 203 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 GRIP1Q9Y3R0 1128 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 CEPT1Q9Y6K0 416 aa4.22□□□□□ -1.73
CMSS1-209ENST00000497345 IGKV1D-43A0A0B4J1Z2 117 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 A0A1B0GTH9 108 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SMIM31A0A1B0GVY4 71 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 MED19A0JLT2 244 aaPredicted RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 IRGMA1A4Y4 181 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SMIM30A4D0T7 59 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 HTR3EA5X5Y0 456 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 A6NIZ1 184 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 AQP7P3A6NL99 342 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 E9PI62 339 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ZNF670-ZNF695F2Z2N8 137 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SMAD9O15198 467 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 KHDRBS3O75525 346 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 KRT33AO76009 404 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 AQP8O94778 261 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 GLCEO94923 617 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 TXNDC12O95881 172 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 IGF2P01344 180 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 QDPRP09417 244 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SBK2P0C263 348 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 LIMS3P0CW19 117 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 LIMS4P0CW20 117 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 OR8G3PP0DMU2 310 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 PSKH1P11801 424 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 PIPP12273 146 aaPredicted RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ZNF823P16415 610 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 DCKP27707 260 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 CSNK1A1P48729 337 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 CLK1P49759 484 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 LHX2P50458 406 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 P2RY4P51582 365 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 MECP2P51608 486 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SLC25A1P53007 311 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 DLX5P56178 289 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 CLDN18P56856 261 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 TMPRSS3P57727 454 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 OR12D2P58182 307 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 RAP1BP61224 184 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 VBP1P61758 197 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 RAP1AP62834 184 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 RPS25P62851 125 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SIRPAP78324 504 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ADAM8P78325 824 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ROM1Q03395 351 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ZNF85Q03923 595 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SLC3A1Q07837 685 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 RASGEF1BQ0VAM2 473 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 RAB40BQ12829 278 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ZP4Q12836 540 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 EIF2B1Q14232 305 aaKnown RBP4.21□□□□□ -1.74
CMSS1-209ENST00000497345 IRF3Q14653 427 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SPHARQ15513 63 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ODF4Q2M2E3 257 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ANKDD1AQ495B1 522 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 SLC25A30Q5SVS4 291 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 LIPKQ5VXJ0 399 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 CORO6Q6QEF8 472 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ARL9Q6T311 187 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 B3GNT6Q6ZMB0 384 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 TMPRSS11AQ6ZMR5 421 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 C3P1Q6ZMU1 363 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ESPNLQ6ZVH7 1005 aa4.21□□□□□ -1.74
CMSS1-209ENST00000497345 ASB18Q6ZVZ8 466 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms