RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SHFQ7M4L6 423 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 SYT9Q86SS6 491 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 MDP1Q86V88 176 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 SKA3Q8IX90 412 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ENTHD1Q8IYW4 607 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 WDR31Q8NA23 367 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 BBS1Q8NFJ9 593 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 GJC3Q8NFK1 279 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 SLC26A10Q8NG04 563 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 OR6N2Q8NGY6 317 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 PTP4A1Q93096 173 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ZMYND19Q96E35 227 aaPredicted RBP6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF582Q96NG8 517 aaPredicted RBP6.64□□□□□ -1.35
VEGFA-214ENST00000493786 PSMG3-AS1Q96PY0 264 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 CNN2Q99439 309 aaKnown RBP6.64□□□□□ -1.35
VEGFA-214ENST00000493786 DDOQ99489 341 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF416Q9BWM5 594 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 HCAR1Q9BXC0 346 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 C1QTNF6Q9BXI9 259 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 DNAJC27Q9NZQ0 273 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ASH2LQ9UBL3 628 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 WARS2Q9UGM6 360 aaKnown RBP6.64□□□□□ -1.35
VEGFA-214ENST00000493786 COMMD3-BMI1R4GMX3 469 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 HSPE1-MOB4S4R3N1 261 aa6.64□□□□□ -1.35
VEGFA-214ENST00000493786 SPTBN1Q01082 2364 aaKnown RBP6.64□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF593O00488 134 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 DLGAP1O14490 977 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 SGCEO43556 437 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 DOK2O60496 412 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ENTPD6O75354 484 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 GPANK1O95872 356 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 CRYAAP02489 173 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TFP02787 698 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 THBDP07204 575 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 CD3EP07766 207 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 MRPL3P09001 348 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 PATE4P0C8F1 98 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF32P17041 273 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 SLC2A5P22732 501 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 CRYGSP22914 178 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 PTAFRP25105 342 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 APLNRP35414 380 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 NAA10P41227 235 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 FASNP49327 2511 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 IDH3GP51553 393 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ADARB1P78563 741 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 EFNB1P98172 346 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 CACNA1CQ13936 2221 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 EIF2B1Q14232 305 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ENDOGQ14249 297 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TAF13Q15543 124 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 OCLNQ16625 522 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 MEP1BQ16820 701 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TBC1D28Q2M2D7 210 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 PABPC1L2AQ5JQF8 200 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 SLC25A30Q5SVS4 291 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 AADACL4Q5VUY2 407 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF691Q5VV52 312 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 KRT80Q6KB66 452 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 UGT2A3Q6UWM9 527 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 BCDIN3DQ7Z5W3 292 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ALPK2Q86TB3 2170 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 FAM169BQ8N8A8 192 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF511Q8NB15 262 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 OR1J2Q8NGS2 313 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 RHOXF1Q8NHV9 184 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TFAP2CQ92754 450 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 PIK3IP1Q96FE7 263 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 MYCBPQ99417 103 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TEAD3Q99594 435 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF184Q99676 751 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 OR2H1Q9GZK4 316 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 CDH20Q9HBT6 801 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 PLEK2Q9NYT0 353 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 LAMP5Q9UJQ1 280 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 POU2F3Q9UKI9 436 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 RAB26Q9ULW5 256 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 RPL36Q9Y3U8 105 aaKnown RBP6.63□□□□□ -1.35
VEGFA-214ENST00000493786 SPEF1Q9Y4P9 236 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 TMEM14AQ9Y6G1 99 aa6.63□□□□□ -1.35
VEGFA-214ENST00000493786 FREM1Q5H8C1 2179 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.62□□□□□ -1.35
VEGFA-214ENST00000493786 IRGMA1A4Y4 181 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 CCDC182A6NF36 153 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 OR6C6A6NF89 314 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 A6NNC1 897 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 E9PQ18 207 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 ZNF670-ZNF695F2Z2N8 137 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 PHYHO14832 338 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 SELENOFO60613 162 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 CLIC3O95833 236 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 IGKV3-15P01624 115 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 SERPINA5P05154 406 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 SCG5P05408 212 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 MMP7P09237 267 aaPredicted RBP6.62□□□□□ -1.35
VEGFA-214ENST00000493786 CCNOP22674 350 aa6.62□□□□□ -1.35
VEGFA-214ENST00000493786 CD40P25942 277 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms