RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 ZNF587BE7ETH6 402 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 C11orf98E9PRG8 122 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 BHLHE40O14503 412 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 CASKO14936 926 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 DHHO43323 396 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 CRLF1O75462 422 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 LYZL6O75951 148 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 CCNB2O95067 398 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 MPIG6BO95866 241 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 IGKV3-15P01624 115 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 IGHV3-9P01782 118 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 IGHG1P01857 330 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 SAGP10523 405 aaPredicted RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 NR2C1P13056 603 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 OSMP13725 252 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 ANXA8P13928 327 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 PTNP21246 168 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 GSTM3P21266 225 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 THBS2P35442 1172 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 GPR4P46093 362 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 NR1H2P55055 460 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 MRPS34P82930 218 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 ARF1P84077 181 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 ROR2Q01974 943 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 LGALS3BPQ08380 585 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 CAMK2DQ13557 499 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 ATP6AP1Q15904 470 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 KCNMB1Q16558 191 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 CEACAM16Q2WEN9 425 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 TBRG1Q3YBR2 411 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 BEX5Q5H9J7 111 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 FAM27BQ5VT28 67 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 C1orf146Q5VVC0 180 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 FAHD1Q6P587 224 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 SHQ1Q6PI26 577 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 SMARCD3Q6STE5 483 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 TEPPQ6URK8 271 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 ZNF620Q6ZNG0 422 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 DPPA2Q7Z7J5 298 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 SPATA24Q86W54 205 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 KRTAP1-3Q8IUG1 177 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 LYSMD2Q8IV50 215 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 C10orf67Q8IYJ2 551 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 UBE2J2Q8N2K1 259 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 GPR137CQ8N3F9 429 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 LNX2Q8N448 690 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 OR13C2Q8NGS9 318 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 HDAC2Q92769 488 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 MCHR2Q969V1 340 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 RSRC1Q96IZ7 334 aaKnown RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 TSPAN32Q96QS1 320 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 FEVQ99581 238 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 WACQ9BTA9 647 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 MED18Q9BUE0 208 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 OSBPL10Q9BXB5 764 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 OR52D1Q9H346 318 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 REEP1Q9H902 201 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 ZNF224Q9NZL3 707 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 AURKCQ9UQB9 309 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 AMDHD2Q9Y303 409 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 UGT2A1Q9Y4X1 527 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 AP4S1Q9Y587 144 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 MAGED1Q9Y5V3 778 aaPredicted RBP5.86□□□□□ -1.47
VPS52-219ENST00000493379 V9GYQ6 96 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 DYSFO75923 2080 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 IGKV1D-43A0A0B4J1Z2 117 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 CIB4A0PJX0 185 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 SLC22A23A1A5C7 686 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 PRSS37A4D1T9 235 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 E9PQ18 207 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 H3BNX3 289 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 OR10H3O60404 316 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 TMCC2O75069 709 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ENTPD5O75356 428 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 APOL3O95236 402 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 LPLP06858 475 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 QDPRP09417 244 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 FCGR1AP12314 374 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 PAX1P15863 534 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 CBR1P16152 277 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NPR2P20594 1047 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 IL32P24001 234 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 PTAFRP25105 342 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 CDKN2AP42771 156 aaKnown RBP5.85□□□□□ -1.47
VPS52-219ENST00000493379 CSNK1A1P48729 337 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 RPS6KA3P51812 740 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 EFNB1P98172 346 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 CDK5Q00535 292 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ROM1Q03395 351 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 SNTB1Q13884 538 aaKnown RBP5.85□□□□□ -1.47
VPS52-219ENST00000493379 PPA1Q15181 289 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 TSC22D1Q15714 1073 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 FGD3Q5JSP0 725 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ZFP1Q6P2D0 407 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ADCK1Q86TW2 530 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 PARP8Q8N3A8 854 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 IL17RDQ8NFM7 739 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 OR5K1Q8NHB7 308 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 LILRB1Q8NHL6 650 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms