RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 P4HA3Q7Z4N8 544 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 BCDIN3DQ7Z5W3 292 aaKnown RBP8.28□□□□□ -1.08
CSTF1-206ENST00000493039 LIX1LQ8IVB5 337 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 INTS1Q8N201 2190 aaKnown RBP8.28□□□□□ -1.08
CSTF1-206ENST00000493039 DHRSXQ8N5I4 330 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 SYT14Q8NB59 555 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 CYB561A3Q8NBI2 242 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 ZNRF4Q8WWF5 429 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 TMEM45BQ96B21 275 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 STARD4Q96DR4 205 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-206ENST00000493039 MUS81Q96NY9 551 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 CMC2Q9NRP2 79 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF226Q9NYT6 803 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 TVP23BQ9NYZ1 205 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 Q9UFV3 132 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-206ENST00000493039 NUP50Q9UKX7 468 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 ORC6Q9Y5N6 252 aa8.28□□□□□ -1.08
CSTF1-206ENST00000493039 ARHGEF9O43307 516 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 NOS1APO75052 506 aaPredicted RBP8.27□□□□□ -1.08
CSTF1-206ENST00000493039 COX5BP10606 129 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 CDH2P19022 906 aaPredicted RBP8.27□□□□□ -1.08
CSTF1-206ENST00000493039 GRK5P34947 590 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 CAPGP40121 348 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 ISL1P61371 349 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 CRMP1Q14194 572 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 LAIR2Q6ISS4 152 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 ZBTB46Q86UZ6 589 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 SLC37A3Q8NCC5 494 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 OR52E2Q8NGJ4 325 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 CYGBQ8WWM9 190 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 PHF21AQ96BD5 680 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 SLC25A44Q96H78 314 aaPredicted RBP8.27□□□□□ -1.08
CSTF1-206ENST00000493039 TSSK2Q96PF2 358 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF184Q99676 751 aaPredicted RBP8.27□□□□□ -1.08
CSTF1-206ENST00000493039 TINAGL1Q9GZM7 467 aaPredicted RBP8.27□□□□□ -1.08
CSTF1-206ENST00000493039 BRD7Q9NPI1 651 aa8.27□□□□□ -1.08
CSTF1-206ENST00000493039 SLC22A23A1A5C7 686 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 PRSS37A4D1T9 235 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 FAM183AA6NL82 134 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 H0YAE9 185 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 UPK3AO75631 287 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 IGHV3-9P01782 118 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 DAP3P51398 398 aaKnown RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 FOXG1P55316 489 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 FMODQ06828 376 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 ITGADQ13349 1161 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 KRR1Q13601 381 aaKnown RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 KEAP1Q14145 624 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 ETFDHQ16134 617 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 TSPO2Q5TGU0 170 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 CARD17Q5XLA6 110 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 OR2A2Q6IF42 318 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 NIPAL3Q6P499 406 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 AAED1Q7RTV5 226 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 MCEMP1Q8IX19 187 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 ENTHD1Q8IYW4 607 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 TCEANCQ8N8B7 351 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 SDR9C7Q8NEX9 313 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 IL4I1Q96RQ9 567 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 MRPL37Q9BZE1 423 aaKnown RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 NMNAT2Q9BZQ4 307 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 RIMS4Q9H426 269 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 MED20Q9H944 212 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 HINT3Q9NQE9 182 aaKnown RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 VSX1Q9NZR4 365 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-206ENST00000493039 BAIAP2Q9UQB8 552 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 RCE1Q9Y256 329 aa8.27□□□□□ -1.09
CSTF1-206ENST00000493039 TENM4Q6N022 2769 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 PYCARD-AS1I3L0S3 204 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 CCL21O00585 134 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 LRRTM2O43300 516 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 TLX2O43763 284 aaPredicted RBP8.26□□□□□ -1.09
CSTF1-206ENST00000493039 MRPL33O75394 65 aaKnown RBP8.26□□□□□ -1.09
CSTF1-206ENST00000493039 IL2RAP01589 272 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 TMIGD3P0DMS9 266 aaPredicted RBP8.26□□□□□ -1.09
CSTF1-206ENST00000493039 DBTP11182 482 aaKnown RBP8.26□□□□□ -1.09
CSTF1-206ENST00000493039 SIRPAP78324 504 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 ADORA2A-AS1P86434 159 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSTF1-206ENST00000493039 CDSNQ15517 529 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 SNAPC1Q16533 368 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 RIPPLY2Q5TAB7 128 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 ZNF691Q5VV52 312 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 TFAP2EQ6VUC0 442 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 C20orf196Q8IYI0 205 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 OR6V1Q8N148 313 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 SLC24A4Q8NFF2 622 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 BBS1Q8NFJ9 593 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 RHOXF1Q8NHV9 184 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 APH1BQ8WW43 257 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 TMEM54Q969K7 222 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 SYT4Q9H2B2 425 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 FN3KQ9H479 309 aa8.26□□□□□ -1.09
CSTF1-206ENST00000493039 SLC7A10Q9NS82 523 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms