RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 H2AFY2Q9P0M6 372 aaPredicted RBP6.68□□□□□ -1.34
CLDN1-202ENST00000490800 B3GAT1Q9P2W7 334 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 CLCF1Q9UBD9 225 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLDN1-202ENST00000490800 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 PCDHGB1Q9Y5G3 927 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 SNX5Q9Y5X3 404 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
CLDN1-202ENST00000490800 ARHGAP21Q5T5U3 1957 aa6.68□□□□□ -1.34
CLDN1-202ENST00000490800 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 MED13LQ71F56 2210 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 A0A1W2PRG6 482 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 NPIPB13A6NJU9 1138 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 NPIPB4C9JG80 1138 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 H7C1C5 153 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 M0R3G1 203 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TNFSF11O14788 317 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 RAMP1O60894 148 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SERPINI2O75830 405 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TNFSF13O75888 250 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 APOL3O95236 402 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 FADS2O95864 444 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 GYPBP06028 91 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SPI1P17947 270 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 PAICSP22234 425 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ACVR1BP36896 505 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 MTNR1AP48039 350 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 LCN6P62502 163 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 H3F3AP84243 136 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SORDQ00796 357 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 EMX1Q04741 257 aaPredicted RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 IKZF1Q13422 519 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TMED1Q13445 227 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 KLHL12Q53G59 568 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 KLHL22Q53GT1 634 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ARMC4Q5T2S8 1044 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 RNLSQ5VYX0 342 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 LEG1Q6P5S2 330 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 PAQR6Q6TCH4 344 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 B3GLCTQ6Y288 498 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 PXKQ7Z7A4 578 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TGIF2LYQ8IUE0 185 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 WDFY1Q8IWB7 410 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 CNEP1R1Q8N9A8 125 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 OR4F15Q8NGB8 312 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 OR9Q1Q8NGQ5 310 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 OR2V1Q8NHB1 315 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ZNRF4Q8WWF5 429 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ASB10Q8WXI3 467 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 MUL1Q969V5 352 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TMEM80Q96HE8 168 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TXNDC15Q96J42 360 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 DACH2Q96NX9 599 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SNX18Q96RF0 628 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TEAD3Q99594 435 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 NAA11Q9BSU3 229 aaPredicted RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 CDADC1Q9BWV3 514 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 CDCA4Q9BXL8 241 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 SRXN1Q9BYN0 137 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 OR51V1Q9H2C8 321 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 PIGMQ9H3S5 423 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 PLEKHF2Q9H8W4 249 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 FGF20Q9NP95 211 aaPredicted RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 TAS2R16Q9NYV7 291 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 GRHPRQ9UBQ7 328 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 WARS2Q9UGM6 360 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 DIMT1Q9UNQ2 313 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 EXOGQ9Y2C4 368 aaKnown RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 COMMD3-BMI1R4GMX3 469 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
CLDN1-202ENST00000490800 ITPR3Q14573 2671 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 VPS13CQ709C8 3753 aa6.67□□□□□ -1.34
CLDN1-202ENST00000490800 IGHV3-15A0A0B4J1V0 119 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 LOC102725191A0A1B0GVB3 256 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 A0A1W2PPR1 153 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 IRGMA1A4Y4 181 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 PRSS37A4D1T9 235 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 A6NIZ1 184 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 SLC22A20A6NK97 555 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 J3QRE1 110 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 DCTN6O00399 190 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 CASKO14936 926 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 SEC14L5O43304 696 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 ARHGEF9O43307 516 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 DNPH1O43598 174 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 TRAF3IP2O43734 574 aaPredicted RBP6.66□□□□□ -1.34
CLDN1-202ENST00000490800 CXCL13O43927 109 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 EIF1BO60739 113 aaKnown RBP6.66□□□□□ -1.34
CLDN1-202ENST00000490800 INMTO95050 263 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 ZNF205O95201 554 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 RAB36O95755 333 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 BCL10O95999 233 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 RENP00797 406 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 HRGP04196 525 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 LCKP06239 509 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 DCKP27707 260 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 HOXC12P31275 282 aa6.66□□□□□ -1.34
CLDN1-202ENST00000490800 KIR2DL2P43627 348 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms