RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 TMEM54Q969K7 222 aa18.11■□□□□ 0.49
PHF1-209ENST00000487667 OR14A2Q96R54 314 aa18.11■□□□□ 0.49
PHF1-209ENST00000487667 C1orf198Q9H425 327 aa18.11■□□□□ 0.49
PHF1-209ENST00000487667 NIPAL2Q9H841 368 aa18.11■□□□□ 0.49
PHF1-209ENST00000487667 CYB5R1Q9UHQ9 305 aa18.11■□□□□ 0.49
PHF1-209ENST00000487667 PTPRBP23467 1997 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 TRBV5-5A0A0J9YX44 114 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 NOTOA8MTQ0 251 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 RAMP1O60894 148 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 QDPRP09417 244 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 RPS27P42677 84 aaKnown RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 CLDN20P56880 219 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 BCL2A1Q16548 175 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 SFXN4Q6P4A7 337 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 DCXRQ7Z4W1 244 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 LAX1Q8IWV1 398 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 OR2AJ1Q8NGZ0 328 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 RNF133Q8WVZ7 376 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 DIRAS2Q96HU8 199 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 FOXN4Q96NZ1 517 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 AMELYQ99218 206 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 MRI1Q9BV20 369 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 ZCCHC4Q9H5U6 513 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 CCDC86Q9H6F5 360 aaKnown RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 PLA2G3Q9NZ20 509 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 IGKV1D-43A0A0B4J1Z2 117 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 A0A1W2PPL8 197 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 ZNF891A8MT65 544 aaPredicted RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 SMAD9O15198 467 aaKnown RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 GLSO94925 669 aaPredicted RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 SRMP19623 302 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 LSM6P62312 80 aaKnown RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 ARG2P78540 354 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 LRRC69Q6ZNQ3 347 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 DERL3Q96Q80 235 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 OR2M2Q96R28 347 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 SRXN1Q9BYN0 137 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 PPIL3Q9H2H8 161 aaKnown RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 ABRACLQ9P1F3 81 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 ING1Q9UK53 422 aaPredicted RBP18.1■□□□□ 0.49
PHF1-209ENST00000487667 LRP12Q9Y561 859 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 R4GMQ9 66 aa18.1■□□□□ 0.49
PHF1-209ENST00000487667 ACOT7O00154 380 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 MPZL1O95297 269 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 IDNKQ5T6J7 187 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 XKRXQ6PP77 449 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 WDFY1Q8IWB7 410 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 MEIOBQ8N635 442 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 POC5Q8NA72 575 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 ZFP62Q8NB50 900 aaPredicted RBP18.09■□□□□ 0.49
PHF1-209ENST00000487667 OR13C5Q8NGS8 318 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 OR10D3Q8NH80 312 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 SCMH1Q96GD3 660 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 UCN2Q96RP3 112 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.09■□□□□ 0.49
PHF1-209ENST00000487667 SEC61A2Q9H9S3 476 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 COMMD3Q9UBI1 195 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 POLR1DQ9Y2S0 133 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 ALPK2Q86TB3 2170 aa18.09■□□□□ 0.49
PHF1-209ENST00000487667 FABP12A6NFH5 140 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 H2BFMP0C1H6 154 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 PSKH1P11801 424 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 EIF1AXP47813 144 aaKnown RBP18.08■□□□□ 0.49
PHF1-209ENST00000487667 MEOX1P50221 254 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 CAV3P56539 151 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 CBX3Q13185 183 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 CARD17Q5XLA6 110 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 ABLIM2Q6H8Q1 611 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 KLHL24Q6TFL4 600 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 VASH2Q86V25 355 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 TMEM123Q8N131 208 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 HSD17B8Q92506 261 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 ACKR4Q9NPB9 350 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 NOX4Q9NPH5 578 aa18.08■□□□□ 0.49
PHF1-209ENST00000487667 DVL2O14641 736 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 CXCL13O43927 109 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 APEX1P27695 318 aaKnown RBP18.08■□□□□ 0.48
PHF1-209ENST00000487667 ZNF84P51523 738 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 FAM27D1Q5T7N8 215 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 LRFN4Q6PJG9 635 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 ZNF704Q6ZNC4 412 aaPredicted RBP18.08■□□□□ 0.48
PHF1-209ENST00000487667 FOXL2NBQ6ZUU3 175 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 GALNTL5Q7Z4T8 443 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 GDPD1Q8N9F7 314 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 SETD6Q8TBK2 473 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 MIXL1Q9H2W2 232 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 ZNF552Q9H707 407 aaPredicted RBP18.08■□□□□ 0.48
PHF1-209ENST00000487667 TCF7L1Q9HCS4 588 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 B3GAT2Q9NPZ5 323 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 POLE4Q9NR33 117 aa18.08■□□□□ 0.48
PHF1-209ENST00000487667 CEP250Q9BV73 2442 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 IGHV3-15A0A0B4J1V0 119 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 TRABD2BA6NFA1 517 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 A6NL46 340 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 NKX2-8O15522 239 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 SLC43A1O75387 559 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 NCR1O76036 304 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 ACTL6AO96019 429 aa18.07■□□□□ 0.48
PHF1-209ENST00000487667 MMP16P51512 607 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms