RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SLC25A11Q02978 314 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 MADCAM1Q13477 382 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CHRNA6Q15825 494 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 KCTD19Q17RG1 926 aaPredicted RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 KLHL40Q2TBA0 621 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 BZW1Q7L1Q6 419 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SCD5Q86SK9 330 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 MMAAQ8IVH4 418 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 C12orf56Q8IXR9 622 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 C10orf67Q8IYJ2 551 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 Q8N976 141 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CCDC112Q8NEF3 446 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 OR10G4Q8NGN3 311 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF596Q8TC21 504 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 ZFP90Q8TF47 636 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 ANKRD7Q92527 254 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CREB3L1Q96BA8 519 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 DUS3LQ96G46 650 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 PANX1Q96RD7 426 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 NEUROG2Q9H2A3 272 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 TPK1Q9H3S4 243 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 BATF3Q9NR55 127 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 HRASLS2Q9NWW9 162 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 GCNT4Q9P109 453 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 LGALS13Q9UHV8 139 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 MRPS18BQ9Y676 258 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SCN2AQ99250 2005 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 TRIOBPQ9H2D6 2365 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CNTLNQ9NXG0 1405 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 RB1CC1Q8TDY2 1594 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 POLR1AO95602 1720 aaPredicted RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ASTN1O14525 1302 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 SYNRGQ9UMZ2 1314 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 CTTNBP2Q8WZ74 1663 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 BAZ1BQ9UIG0 1483 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 IGLV4-69A0A075B6H9 119 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 TRBV9A0A0B4J1U6 114 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 IGHV3-66A0A0C4DH42 116 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ANGPTL7O43827 346 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 KLHL41O60662 606 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 FABP3P05413 133 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ACSM4P0C7M7 580 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 GALP22466 123 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 U2AF2P26368 475 aaKnown RBP eCLIP2.22□□□□□ -2.052e-6■■■□□ 18.3
SNRNP27-204ENST00000487029 MAS1LP35410 378 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 LONP1P36776 959 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 MXD1Q05195 221 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 MERTKQ12866 999 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 SELENBP1Q13228 472 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 SF3A2Q15428 464 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 POU2AF1Q16633 256 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 SOHLH1Q5JUK2 328 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 HES5Q5TA89 166 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 OTUD6AQ7L8S5 288 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 LUZP2Q86TE4 346 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 PRELID2Q8N945 189 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 CCDC148Q8NFR7 591 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 OR52K2Q8NGK3 314 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 TSEN15Q8WW01 171 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 BMFQ96LC9 184 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 OR5B12Q96R08 314 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 PARP12Q9H0J9 701 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 EXO5Q9H790 373 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 GEMIN7Q9H840 131 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 TMEM165Q9HC07 324 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 SLC40A1Q9NP59 571 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ISYNA1Q9NPH2 558 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 LHX9Q9NQ69 397 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 OR12D3Q9UGF7 316 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 KLK12Q9UKR0 248 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 RRBP1Q9P2E9 1410 aaKnown RBP2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ANKRD30AQ9BXX3 1397 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ERICH3Q5RHP9 1530 aa2.22□□□□□ -2.05
SNRNP27-204ENST00000487029 ELP1O95163 1332 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CCDC171Q6TFL3 1326 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 MTCL1Q9Y4B5 1905 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 LYRM9A8MSI8 78 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 INS-IGF2F8WCM5 200 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 SNAI2O43623 268 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 NEMFO60524 1076 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 SPAG7O75391 227 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 E2F6O75461 281 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 RETP07949 1114 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 MYL2P10916 166 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CCNB1P14635 433 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 RAB3BP20337 219 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 F2RP25116 425 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 DCKP27707 260 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 GTF2E2P29084 291 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 GPX4P36969 197 aaPredicted RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CDKN2BP42772 138 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 PPOXP50336 477 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 LIPEQ05469 1076 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 LRRC63Q05C16 580 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 DYNC1I2Q13409 638 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 EIF4EBP2Q13542 120 aaPredicted RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 GINS1Q14691 196 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 THEM4Q5T1C6 240 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 KHDRBS2Q5VWX1 349 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms