RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TBC1D28Q2M2D7 210 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 SLC27A4Q6P1M0 643 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 FAHD1Q6P587 224 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 LRRC75A-AS1Q8N1F1 130 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 SVOPLQ8N434 492 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 SLC37A3Q8NCC5 494 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 CPEB3Q8NE35 698 aaKnown RBP18.1■□□□□ 0.49
SEC13-217ENST00000482647 OR2T4Q8NH00 348 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 DDOQ99489 341 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 TRAF4Q9BUZ4 470 aaPredicted RBP18.1■□□□□ 0.49
SEC13-217ENST00000482647 RACGAP1Q9H0H5 632 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 CBLN4Q9NTU7 201 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 MPZL1O95297 269 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 BMP4P12644 408 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 PAX1P15863 534 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 GRK5P34947 590 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 APLNRP35414 380 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 SERPINF1P36955 418 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 SCRN3Q0VDG4 424 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 GINS1Q14691 196 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 TESK1Q15569 626 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 VHLLQ6RSH7 139 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 CYB561A3Q8NBI2 242 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 AKR7LQ8NHP1 331 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 C11orf40Q8WZ69 217 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 TEX12Q9BXU0 123 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 SEMA6AQ9H2E6 1030 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 FN3KQ9H479 309 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 ZNF442Q9H7R0 627 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 CDH20Q9HBT6 801 aa18.09■□□□□ 0.49
SEC13-217ENST00000482647 ZNF701Q9NV72 531 aaPredicted RBP18.09■□□□□ 0.49
SEC13-217ENST00000482647 HEATR1Q9H583 2144 aaKnown RBP18.08■□□□□ 0.49
SEC13-217ENST00000482647 PLCE1Q9P212 2302 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 OVOL3O00110 214 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 HMGN1P05114 100 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 STOMP27105 288 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 APEX1P27695 318 aaKnown RBP18.08■□□□□ 0.48
SEC13-217ENST00000482647 THBS4P35443 961 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 DAPP51397 102 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 NKX6-1P78426 367 aaPredicted RBP18.08■□□□□ 0.48
SEC13-217ENST00000482647 SNTB2Q13425 540 aaKnown RBP18.08■□□□□ 0.48
SEC13-217ENST00000482647 KRT80Q6KB66 452 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 IQCF1Q8N6M8 205 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 PROKR2Q8NFJ6 384 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 RBM4Q9BWF3 364 aaKnown RBP18.08■□□□□ 0.48
SEC13-217ENST00000482647 GSX2Q9BZM3 304 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 WNT5BQ9H1J7 359 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 CMC2Q9NRP2 79 aa18.08■□□□□ 0.48
SEC13-217ENST00000482647 RAI1Q7Z5J4 1906 aaPredicted RBP18.08■□□□□ 0.48
SEC13-217ENST00000482647 FAM171A2A8MVW0 826 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 SNAP29O95721 258 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 HLA-DQA2P01906 255 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 OR4A8P0C604 315 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 GAAP10253 952 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 CCL2P13500 99 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 ZNF3P17036 446 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 PTH2RP49190 550 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 GDI2P50395 445 aaKnown RBP18.07■□□□□ 0.48
SEC13-217ENST00000482647 SLC25A1P53007 311 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 TEKQ02763 1124 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 AQP6Q13520 282 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 CRMP1Q14194 572 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 ADIPOQQ15848 244 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 ZNF774Q6NX45 483 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 PARP8Q8N3A8 854 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 SLC26A10Q8NG04 563 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 TRMT61AQ96FX7 289 aaKnown RBP18.07■□□□□ 0.48
SEC13-217ENST00000482647 PERPQ96FX8 193 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 GABARAPL1Q9H0R8 117 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 ASH2LQ9UBL3 628 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 POLR1DQ9Y2S0 133 aa18.07■□□□□ 0.48
SEC13-217ENST00000482647 DSCAMO60469 2012 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 H3BNX3 289 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 GPANK1O95872 356 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 CCNOP22674 350 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 PCSK6P29122 969 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 GLRXP35754 106 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 RPS23P62266 143 aaKnown RBP18.06■□□□□ 0.48
SEC13-217ENST00000482647 CDK5Q00535 292 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 GABPB1Q06547 395 aaPredicted RBP18.06■□□□□ 0.48
SEC13-217ENST00000482647 ACSM5Q6NUN0 579 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 SPNS3Q6ZMD2 512 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.06■□□□□ 0.48
SEC13-217ENST00000482647 PAQR4Q8N4S7 273 aaPredicted RBP18.06■□□□□ 0.48
SEC13-217ENST00000482647 OR10H5Q8NGA6 315 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 CDADC1Q9BWV3 514 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 KRT84Q9NSB2 600 aa18.06■□□□□ 0.48
SEC13-217ENST00000482647 C5orf49A4QMS7 147 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 B9A039 149 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 SGCEO43556 437 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 TFP02787 698 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 PAICSP22234 425 aaKnown RBP18.05■□□□□ 0.48
SEC13-217ENST00000482647 PYCR1P32322 319 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 CDKN1AP38936 164 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 RAD52P43351 418 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 CRISP1P54107 249 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 ESRRGP62508 458 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 DBPQ10586 325 aaPredicted RBP18.05■□□□□ 0.48
SEC13-217ENST00000482647 EFNB3Q15768 340 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 OTPQ5XKR4 325 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms