RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 DHHO43323 396 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CLEC2LP0C7M8 214 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CD53P19397 219 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 ID4P47928 161 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 GDI2P50395 445 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 FAM27D1Q5T7N8 215 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CFAP77Q6ZQR2 320 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 EGFL6Q8IUX8 553 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PRSS35Q8N3Z0 413 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 RGP1Q92546 391 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PPP1R14AQ96A00 147 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 DACH2Q96NX9 599 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 TTYH2Q9BSA4 534 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 RBM24Q9BX46 236 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 BARHL1Q9BZE3 327 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PRDM14Q9GZV8 571 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 BCO1Q9HAY6 547 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 LUZP4Q9P127 313 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 B3GNT3Q9Y2A9 372 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 AQP7O14520 342 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 SLC43A1O75387 559 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 SRSF10O75494 262 aaKnown RBP12.75□□□□□ -0.37
COL4A6-206ENST00000477085 ZFPL1O95159 310 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 TACSTD2P09758 323 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 TUBA1BP68363 451 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 TUBA1AQ71U36 451 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 ADGRE4PQ86SQ3 457 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
COL4A6-206ENST00000477085 CDADC1Q9BWV3 514 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 ULBP2Q9BZM5 246 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 CRLF2Q9HC73 371 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 LRP12Q9Y561 859 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 URB1O60287 2271 aaKnown RBP12.75□□□□□ -0.37
COL4A6-206ENST00000477085 DNAJC13O75165 2243 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 ACACAQ13085 2346 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
COL4A6-206ENST00000477085 RGS9O75916 674 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 CD1AP06126 327 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 GALP22466 123 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 SDC2P34741 201 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 OPRL1P41146 370 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 MAGEB1P43366 347 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 KIR3DL2P43630 455 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 MFGE8Q08431 387 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ALKBH1Q13686 389 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ENDOGQ14249 297 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 SGCAQ16586 387 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 TSPO2Q5TGU0 170 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 OR7E24Q6IFN5 339 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 KBTBD8Q8NFY9 601 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 OR10H5Q8NGA6 315 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 OR2G2Q8NGZ5 317 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 RNF133Q8WVZ7 376 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF416Q9BWM5 594 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 MROQ9BYG7 248 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ASH2LQ9UBL3 628 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 GDF2Q9UK05 429 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 NOSIPQ9Y314 301 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 RER1O15258 196 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 CLPXO76031 633 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 CDRT1O95170 752 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 C1QTNF9P0C862 333 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 ACSM3Q53FZ2 586 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 FDX2Q6P4F2 183 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 NUFIP2Q7Z417 695 aaKnown RBP12.74□□□□□ -0.37
COL4A6-206ENST00000477085 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 KRT77Q7Z794 578 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 SLAMF6Q96DU3 332 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 PRRG4Q9BZD6 226 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 RNF122Q9H9V4 155 aa12.74□□□□□ -0.37
COL4A6-206ENST00000477085 PHF3Q92576 2039 aaKnown RBP12.73□□□□□ -0.37
COL4A6-206ENST00000477085 IGF2RP11717 2491 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 SMIM30A4D0T7 59 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 GPR171O14626 319 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 YES1P07947 543 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 NR2C1P13056 603 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 MXD1Q05195 221 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 DGUOKQ16854 277 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 WDR38Q5JTN6 314 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 KCTD18Q6PI47 426 aaPredicted RBP12.73□□□□□ -0.37
COL4A6-206ENST00000477085 CHMP1BQ7LBR1 199 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms