RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SMIM31A0A1B0GVY4 71 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 TRIM64CA6NLI5 447 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 E9PLN8 166 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 RPL36A-HNRNPH2H7BZ11 118 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 CCRL2O00421 344 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF254O75437 659 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SULT1C4O75897 302 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 WISP2O76076 250 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 RPP14O95059 124 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 MPZL1O95297 269 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 APOC1P02654 83 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 CST2P09228 141 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 LIMS3P0CW19 117 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 LIMS4P0CW20 117 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 PCMT1P22061 227 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 IL32P24001 234 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 EDNRAP25101 427 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 RPS27P42677 84 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 HCCSP53701 268 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 GRB2P62993 217 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ARF1P84077 181 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 BDH1Q02338 343 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 DBPQ10586 325 aaPredicted RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 MLLT11Q13015 90 aaPredicted RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 IRF3Q14653 427 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 KCNMB1Q16558 191 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 TSTQ16762 297 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 PHYHD1Q5SRE7 291 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 OR2G6Q5TZ20 316 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 MTFR2Q6P444 385 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ANKRD16Q6P6B7 361 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 TFAP2EQ6VUC0 442 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 Q6ZT83 130 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SPATC1Q76KD6 591 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SATL1Q86VE3 508 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 KLBQ86Z14 1044 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 EGFL6Q8IUX8 553 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF679Q8IYX0 411 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNRF4Q8WWF5 429 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SPTSSAQ969W0 71 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 NMD3Q96D46 503 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 SLAMF6Q96DU3 332 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 VKORC1Q9BQB6 163 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ABHD6Q9BV23 337 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF416Q9BWM5 594 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 COMMD4Q9H0A8 199 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 NIPAL2Q9H841 368 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 MRPL22Q9NWU5 206 aaKnown RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 BABAM2Q9NXR7 383 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 PLEK2Q9NYT0 353 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 CLEC2DQ9UHP7 191 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 GDF2Q9UK05 429 aaPredicted RBP9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 OSGIN2Q9Y236 505 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF835Q9Y2P0 537 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 FAM215AQ9Y5M1 114 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 ASPMQ8IZT6 3477 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 CHD8Q9HCK8 2581 aa9.05□□□□□ -0.96
PRPF38A-202ENST00000474048 MED12LQ86YW9 2145 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 DOCK7Q96N67 2140 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 IQCMA0A1B0GVH7 501 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 PSMD9O00233 223 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SGCEO43556 437 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 DOK2O60496 412 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 INMTO95050 263 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 UBL3O95164 117 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 TFAP2AP05549 437 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 GLI4P10075 376 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CD8BP10966 210 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CD79AP11912 226 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 ALOX5APP20292 161 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 BMP5P22003 454 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 PSMA1P25786 263 aaKnown RBP9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 ARR3P36575 388 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC6A9P48067 706 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF85Q03923 595 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 ECH1Q13011 328 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 P2RY6Q15077 328 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CDONQ4KMG0 1287 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SYT6Q5T7P8 510 aaPredicted RBP9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 FAM27BQ5VT28 67 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 XAF1Q6GPH4 301 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 OR7E24Q6IFN5 339 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 VWA1Q6PCB0 445 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CORO6Q6QEF8 472 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 DEGS2Q6QHC5 323 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 LRRN1Q6UXK5 716 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 FOXL2NBQ6ZUU3 175 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 LUZP2Q86TE4 346 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 P2RY8Q86VZ1 359 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CLVS1Q8IUQ0 354 aaPredicted RBP9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 WDFY1Q8IWB7 410 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SMAP2Q8WU79 429 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms