RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TMCC2O75069 709 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 SLC43A1O75387 559 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 IGHG3P01860 377 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 CPN1P15169 458 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF133P52736 654 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 TRAM1Q15629 374 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 OR7E24Q6IFN5 339 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 EGFL6Q8IUX8 553 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 RPS4Y2Q8TD47 263 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 INTS12Q96CB8 462 aaKnown RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF837Q96EG3 531 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 TAAR6Q96RI8 345 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 POLE4Q9NR33 117 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 FRRS1LQ9P0K9 344 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 LRP12Q9Y561 859 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 LHFPL6Q9Y693 200 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 MED12LQ86YW9 2145 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 IGKV3D-15A0A087WSY6 115 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 RRP8O43159 456 aaKnown RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 DHHO43323 396 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 ZFPL1O95159 310 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 GALP22466 123 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 MS4A15Q8N5U1 240 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 MCFD2Q8NI22 146 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 MAP6Q96JE9 813 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 PPIL3Q9H2H8 161 aaKnown RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 CCDC59Q9P031 241 aaKnown RBP18.2■□□□□ 0.5
TMEM53-207ENST00000468117 DKK4Q9UBT3 224 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 POLR1DQ9Y2S0 133 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 ZNHIT1O43257 154 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 CLEC2LP0C7M8 214 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 ALKBH1Q13686 389 aaKnown RBP18.19■□□□□ 0.5
TMEM53-207ENST00000468117 FAM27D1Q5T7N8 215 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 Q6ZS92 163 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 ALKBH3Q96Q83 286 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-207ENST00000468117 KCNN2Q9H2S1 579 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 CLEC4AQ9UMR7 237 aa18.19■□□□□ 0.5
TMEM53-207ENST00000468117 SHISA3A0PJX4 238 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 SMIM30A4D0T7 59 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 MKRN2OSH3BPM6 223 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 K7ENP7 123 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 SC5DO75845 299 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 RPS11P62280 158 aaKnown RBP eCLIP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 MRPL28Q13084 256 aaKnown RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 SGCAQ16586 387 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF404Q494X3 552 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 ACSM3Q53FZ2 586 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 INO80CQ6PI98 192 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 CEACAM19Q7Z692 300 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 TUSC5Q8IXB3 177 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 RBMXL3Q8N7X1 1067 aaKnown RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 OR2G2Q8NGZ5 317 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 BARHL1Q9BZE3 327 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 CRLF2Q9HC73 371 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 CENPMQ9NSP4 180 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 ASH2LQ9UBL3 628 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 NOSIPQ9Y314 301 aaKnown RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 GTF3C1Q12789 2109 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 GPR171O14626 319 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 IL1AP01583 271 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 CD1AP06126 327 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 SOX6P35712 828 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 GUCA1AP43080 201 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 RIDAP52758 137 aaKnown RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 KCNMB1Q16558 191 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 CFAP77Q6ZQR2 320 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 PRSS35Q8N3Z0 413 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 HAVCR2Q8TDQ0 301 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 DACH2Q96NX9 599 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 NELFAQ9H3P2 528 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 GDF2Q9UK05 429 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-207ENST00000468117 FBXL3Q9UKT7 428 aa18.18■□□□□ 0.5
TMEM53-207ENST00000468117 RTTNQ86VV8 2226 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 ARHGAP21Q5T5U3 1957 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 HSPB2A8KAH6 182 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 PNPP00491 289 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 CALRP27797 417 aaKnown RBP18.17■□□□□ 0.5
TMEM53-207ENST00000468117 HSPB2Q16082 182 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 GPR137CQ8N3F9 429 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 RNF133Q8WVZ7 376 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 TMEM45BQ96B21 275 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 SLAMF6Q96DU3 332 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF416Q9BWM5 594 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 C1orf198Q9H425 327 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 CALHM2Q9HA72 323 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF281Q9Y2X9 895 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 NCOR2Q9Y618 2525 aa18.17■□□□□ 0.5
TMEM53-207ENST00000468117 CASKO14936 926 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 GPRIN2O60269 458 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 MRPL33O75394 65 aaKnown RBP18.16■□□□□ 0.5
TMEM53-207ENST00000468117 MSR1P21757 451 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 ZNF84P51523 738 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 ODF4Q2M2E3 257 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 LINGO2Q7L985 606 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 OR10S1Q8NGN2 331 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 OR2AJ1Q8NGZ0 328 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 OR5AK2Q8NH90 309 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 RGP1Q92546 391 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-207ENST00000468117 SLC25A46Q96AG3 418 aa18.16■□□□□ 0.5
TMEM53-207ENST00000468117 NABP1Q96AH0 204 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms