RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CYCSP99999 105 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 PRRT3Q5FWE3 981 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FIGLAQ6QHK4 219 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 DRAM2Q6UX65 266 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 LRRC75AQ8NAA5 344 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 OR4S1Q8NGB4 309 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 OR10R2Q8NGX6 335 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 KXD1Q9BQD3 176 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 PILRAQ9UKJ1 303 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 HTTP42858 3142 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 GFOD2Q3B7J2 385 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 PHF19Q5T6S3 580 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 LRRC69Q6ZNQ3 347 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF440Q8IYI8 595 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 CPNE2Q96FN4 548 aaPredicted RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 CMKLR1Q99788 373 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 NKX3-1Q99801 234 aaPredicted RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 Q9N2J8 555 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 SMCO4Q9NRQ5 59 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 RCC2Q9P258 522 aaKnown RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 HIDE1A8MVS5 230 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 NPIPB9F8W1W9 429 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 KCNAB3O43448 404 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 TNFSF14O43557 240 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 NUDT21O43809 227 aaKnown RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 STK17BO94768 372 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 HLA-DQA2P01906 255 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 AKR1C4P17516 323 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MAOAP21397 527 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 PTAFRP25105 342 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 ECH1Q13011 328 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MEP1BQ16820 701 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MESTQ5EB52 335 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 EEF1A1P5Q5VTE0 462 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 PLPP4Q5VZY2 271 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 SHISA5Q8N114 240 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 CA13Q8N1Q1 262 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 ASB17Q8WXJ9 295 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 OR8B4Q96RC9 309 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 ZFYVE21Q9BQ24 234 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 SYT4Q9H2B2 425 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 RHOFQ9HBH0 211 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 KCNG2Q9UJ96 466 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 SLC22A13Q9Y226 551 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 TMED7Q9Y3B3 224 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MRPS23Q9Y3D9 190 aaKnown RBP12.37□□□□□ -0.43
PTPRE-204ENST00000455661 EML5Q05BV3 1969 aa12.37□□□□□ -0.43
PTPRE-204ENST00000455661 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 A0A1W2PPC1 479 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CPED1A4D0V7 1026 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TMEM235A6NFC5 223 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 COLCA2A8K830 154 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 H0YGG7 62 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 DUS4LO95620 317 aaKnown RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 ERCC1P07992 297 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 MPZP25189 248 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 VIPR2P41587 438 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CX3CR1P49238 355 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 ARF3P61204 181 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CCINQ13939 588 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CST6Q15828 149 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 SLC16A13Q7RTY0 426 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 C15orf54Q8N8G6 183 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 AMELYQ99218 206 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 NMES1Q9C002 83 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TAS2R4Q9NYW5 299 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 LRIT1Q9P2V4 623 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TBC1D29Q9UFV1 150 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 FITM1A5D6W6 292 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 SERPINF1P36955 418 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CENPAP49450 140 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 RPL18Q07020 188 aaKnown RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 KLHL26Q53HC5 615 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms