RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 DDIT4LQ96D03 193 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 DDOQ99489 341 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 AIFM2Q9BRQ8 373 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 LRP12Q9Y561 859 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 TRAV1-2A0A0B4J238 106 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 TMEM212A6NML5 194 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 WNT11O96014 354 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 ADRA2CP18825 462 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 CRABP1P29762 137 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 HSF1Q00613 529 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 HSF2Q03933 536 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 SLC17A1Q14916 467 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 LINC00303Q3SY05 128 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 CDNFQ49AH0 187 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 TMEM205Q6UW68 189 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 D2HGDHQ8N465 521 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 OR51S1Q8NGJ8 323 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 HYLS1Q96M11 299 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 GPN1Q9HCN4 374 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-213ENST00000454468 B8ZZF3 427 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 C9J4A7 227 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 I3L521 148 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ARPC5O15511 151 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 EIF4E2O60573 245 aaKnown RBP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 SGCBQ16585 318 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 TMEM71Q6P5X7 295 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 H1FNTQ75WM6 255 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 COX15Q7KZN9 410 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 KCTD20Q7Z5Y7 419 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 MVB12AQ96EY5 273 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 TXNIPQ9H3M7 391 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 LOC107986453A0A1B0GWG9 222 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 TMEM235A6NFC5 223 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ACOT7O00154 380 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 PEX14O75381 377 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 IGKV3-11P04433 115 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 IFNA6P05013 189 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 RFC3P40938 356 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 LINC00114Q6XXX2 140 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ANKRD37Q7Z713 158 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF679Q8IYX0 411 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 DND1Q8IYX4 353 aaKnown RBP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 EDAQ92838 391 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ELMOD3Q96FG2 381 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ASH2LQ9UBL3 628 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 PLEKHA6Q9Y2H5 1048 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 SLC22A23A1A5C7 686 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 GABRA4P48169 554 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 IGLV3-21P80748 117 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 TMEM255AQ5JRV8 349 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 STPG1Q5TH74 334 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 PXKQ7Z7A4 578 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 DUSP18Q8NEJ0 188 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 OR11H7Q8NGC8 314 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 S100A13Q99584 98 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 SLC23A1Q9UHI7 598 aa10.76□□□□□ -0.69
SMPD4-213ENST00000454468 ELF5Q9UKW6 265 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-213ENST00000454468 MUC22E2RYF6 1773 aaPredicted RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 A0A1W2PQM1 296 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CREBL2O60519 120 aaPredicted RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CD3DP04234 171 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CCNOP22674 350 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CLDN17P56750 224 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SLC26A5P58743 744 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 RPS18P62269 152 aaKnown RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 C9orf135Q5VTT2 229 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF574Q6ZN55 896 aaPredicted RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 Q6ZTK2 550 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 FAM122BQ7Z309 247 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CPEB2Q7Z5Q1 589 aaKnown RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 IFI44Q8TCB0 444 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SMIM4Q8WVI0 70 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 C4orf45Q96LM5 186 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF224Q9NZL3 707 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 DKKL1Q9UK85 242 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 FBXL2Q9UKC9 423 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 L7N2F9 121 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 GOSR2O14653 212 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 UPK3AO75631 287 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 MPIG6BO95866 241 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CYB5AP00167 134 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 IGHV3-9P01782 118 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 BGLAPP02818 100 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 ITGA5P08648 1049 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SRYQ05066 204 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 MYBPHQ13203 477 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms