RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 HSPE1-MOB4S4R3N1 261 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF503-AS2A6NEH8 195 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 TRIM64BA6NI03 449 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 SAC3D1A6NKF1 404 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 E7EQL1 145 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 G3V2T6 193 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 H3BN98 237 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 H7C1C5 153 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 IFNGP01579 166 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 DANCRP0C864 163 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 PATE4P0C8F1 98 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 OSMP13725 252 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 HIST1H1CP16403 213 aaKnown RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF14P17017 642 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 MSR1P21757 451 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 PRKACGP22612 351 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 DCKP27707 260 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 APLNRP35414 380 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ART1P52961 327 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 RAD23AP54725 363 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 TMBIM6P55061 237 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 LCN6P62502 163 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ADARB1P78563 741 aaKnown RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 GALK2Q01415 458 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 RAB39AQ14964 217 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 SHQ1Q6PI26 577 aaKnown RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 FOXL2NBQ6ZUU3 175 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 TMEM179BQ7Z7N9 219 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 LRRC75A-AS1Q8N1F1 130 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF786Q8N393 782 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 LNX2Q8N448 690 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ATG16L2Q8NAA4 619 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF555Q8NEP9 628 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 NUP37Q8NFH4 326 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 FGFBP3Q8TAT2 258 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 TEX47Q8TBZ9 253 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 NEUROG1Q92886 237 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 TRMT61AQ96FX7 289 aaKnown RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 NMNAT3Q96T66 252 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 NIPSNAP1Q9BPW8 284 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 SYT4Q9H2B2 425 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 NTN4Q9HB63 628 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF224Q9NZL3 707 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 KLHL21Q9UJP4 597 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 FBXO9Q9UK97 447 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 B9D1Q9UPM9 204 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-203ENST00000452013 ORC6Q9Y5N6 252 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 FKBP7Q9Y680 259 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 HCFC1P51610 2035 aa7.71□□□□□ -1.18
COL8A1-203ENST00000452013 IGHV2OR16-5A0A0B4J2B6 119 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 ATP6V1G2-DDX39BF2Z307 99 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 DLGAP1O14490 977 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 BHLHE40O14503 412 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 EI24O14681 340 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 HMGN1P05114 100 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CELA3BP08861 270 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 MMP7P09237 267 aaPredicted RBP7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CTLA4P16410 223 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF32P17041 273 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 POU1F1P28069 291 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CALCRP30988 508 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 RAD52P43351 418 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
COL8A1-203ENST00000452013 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.7□□□□□ -1.18
COL8A1-203ENST00000452013 SPOCK1Q08629 439 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 SCRN3Q0VDG4 424 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 ETFDHQ16134 617 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 KCNMB1Q16558 191 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 TBC1D28Q2M2D7 210 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 PGGHGQ32M88 737 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF773Q6PK81 442 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 UNQ6126/PRO20091Q6UXV3 157 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 PTCHD4Q6ZW05 846 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 THAP5Q7Z6K1 395 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 C8orf59Q8N0T1 100 aaPredicted RBP7.7□□□□□ -1.18
COL8A1-203ENST00000452013 MUC15Q8N387 334 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 NPEPL1Q8NDH3 523 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 SETD9Q8NE22 299 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 SLC30A7Q8NEW0 376 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 OR2T4Q8NH00 348 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 NABP1Q96AH0 204 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 ZNF75AQ96N20 296 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CDADC1Q9BWV3 514 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CXXC4Q9H2H0 198 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 PLGRKTQ9HBL7 147 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CDH20Q9HBT6 801 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 NOX3Q9HBY0 568 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 POLE4Q9NR33 117 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CA10Q9NS85 328 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 CBLN4Q9NTU7 201 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 TBCCD1Q9NVR7 557 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 KIF17Q9P2E2 1029 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 EIF3KQ9UBQ5 218 aaKnown RBP7.7□□□□□ -1.18
COL8A1-203ENST00000452013 PMF1-BGLAPU3KQ54 211 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 MED12LQ86YW9 2145 aa7.7□□□□□ -1.18
COL8A1-203ENST00000452013 PTPN13Q12923 2485 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms