RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FBXO17Q96EF6 278 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 BOD1Q96IK1 185 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 USB1Q9BQ65 265 aaKnown RBP15.23■□□□□ 0.03
SGCE-206ENST00000445866 PLCXD1Q9NUJ7 323 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 ASH2LQ9UBL3 628 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 TIMM10BQ9Y5J6 103 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 MYO7BQ6PIF6 2116 aa15.23■□□□□ 0.03
SGCE-206ENST00000445866 PCBD1P61457 104 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 TUBA1BP68363 451 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 TUBA4AP68366 448 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 SRSF1Q07955 248 aaKnown RBP eCLIP15.22■□□□□ 0.03
SGCE-206ENST00000445866 TUBA1AQ71U36 451 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 P2RY8Q86VZ1 359 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 LINC00346Q8IVM7 164 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 C17orf78Q8N4C9 275 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 ZNF540Q8NDQ6 660 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 HSD17B8Q92506 261 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 YIPF3Q9GZM5 350 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 ADGRL4Q9HBW9 690 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 CCNB1IP1Q9NPC3 277 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 MRPS18AQ9NVS2 196 aaKnown RBP15.22■□□□□ 0.03
SGCE-206ENST00000445866 CYB5R1Q9UHQ9 305 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 KCNG2Q9UJ96 466 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 FADS2O95864 444 aaKnown RBP15.22■□□□□ 0.03
SGCE-206ENST00000445866 GRNP28799 593 aaKnown RBP15.22■□□□□ 0.03
SGCE-206ENST00000445866 RAB1AP62820 205 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 RAB40BQ12829 278 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 SLC36A2Q495M3 483 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 TIMM23BQ5SRD1 257 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 TMEM154Q6P9G4 183 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 THEM6Q8WUY1 208 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 NANOS1Q8WY41 292 aaKnown RBP15.22■□□□□ 0.03
SGCE-206ENST00000445866 C1QTNF6Q9BXI9 259 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 PSORS1C1Q9UIG5 152 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 EXOGQ9Y2C4 368 aaKnown RBP15.22■□□□□ 0.03
SGCE-206ENST00000445866 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 LHFPL6Q9Y693 200 aa15.22■□□□□ 0.03
SGCE-206ENST00000445866 EFCAB10A6NFE3 127 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SLC1A7O00341 560 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 CCDC159P0C7I6 412 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 ARR3P36575 388 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SLC15A1P46059 708 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 TFF3Q07654 80 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SNTB1Q13884 538 aaKnown RBP15.21■□□□□ 0.03
SGCE-206ENST00000445866 PCK2Q16822 640 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 RBM48Q5RL73 367 aaKnown RBP15.21■□□□□ 0.03
SGCE-206ENST00000445866 TMEM53Q6P2H8 277 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SYT9Q86SS6 491 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SLC35F2Q8IXU6 374 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 GJC3Q8NFK1 279 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 OR10H4Q8NGA5 316 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 SSC4DQ8WTU2 575 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 B3GNT2Q9NY97 397 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 NDRG3Q9UGV2 375 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 LAMP5Q9UJQ1 280 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 LRCH1Q9Y2L9 728 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 PCDHGB1Q9Y5G3 927 aa15.21■□□□□ 0.03
SGCE-206ENST00000445866 RER1O15258 196 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 UBL3O95164 117 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 WNT11O96014 354 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 ZNF32P17041 273 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 ST3GAL4Q11206 333 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 AQP6Q13520 282 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 EIF2B1Q14232 305 aaKnown RBP15.2■□□□□ 0.02
SGCE-206ENST00000445866 SLC18B1Q6NT16 456 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 DCXRQ7Z4W1 244 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 DPPA2Q7Z7J5 298 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 CDC20BQ86Y33 519 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 ZNF454Q8N9F8 522 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 OR52I1Q8NGK6 324 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 OTOSQ8NHW6 89 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 TBX5Q99593 518 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 RHNO1Q9BSD3 238 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 WACQ9BTA9 647 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 YTHDF1Q9BYJ9 559 aaKnown RBP15.2■□□□□ 0.02
SGCE-206ENST00000445866 OR10A4Q9H209 315 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 ZNF224Q9NZL3 707 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 GDF2Q9UK05 429 aaPredicted RBP15.2■□□□□ 0.02
SGCE-206ENST00000445866 MYRFQ9Y2G1 1151 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 AMDHD2Q9Y303 409 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 TMEM14AQ9Y6G1 99 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 MYO18BQ8IUG5 2567 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 MED12LQ86YW9 2145 aa15.2■□□□□ 0.02
SGCE-206ENST00000445866 ARPC4-TTLL3A0A0A6YYG9 625 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 ZNF503-AS2A6NEH8 195 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 OR2T7P0C7T2 308 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 RNF224P0DH78 156 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 PSKH1P11801 424 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 PPP3CBP16298 524 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 ALOX5APP20292 161 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 CRHBPP24387 322 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 CCKARP32238 428 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 PSG4Q00888 419 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 PPA1Q15181 289 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 TAB1Q15750 504 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 GSG1Q2KHT4 349 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 C22orf34Q6ZV56 151 aa15.19■□□□□ 0.02
SGCE-206ENST00000445866 MDP1Q86V88 176 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms