RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 A0A096LNT2 108 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 FAM171A2A8MVW0 826 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 SSX4O60224 188 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 FKBP6O75344 327 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 KHDRBS3O75525 346 aaKnown RBP11.41□□□□□ -0.58
LINC00399-201ENST00000439008 CLPTM1O96005 669 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 GAAP10253 952 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 PSKH1P11801 424 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 PRKACGP22612 351 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 GLRXP35754 106 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 IFNGR2P38484 337 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 CCNIQ14094 377 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 ADCK1Q86TW2 530 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 ZNF525Q8N782 197 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 OR10G2Q8NGC3 310 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 C11orf40Q8WZ69 217 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 C18orf12Q96KH6 178 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 FEVQ99581 238 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 LRMDAQ9H2I8 198 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 SRA1Q9HD15 236 aaKnown RBP11.41□□□□□ -0.58
LINC00399-201ENST00000439008 CCNB1IP1Q9NPC3 277 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 ARMC1Q9NVT9 282 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 B9D1Q9UPM9 204 aa11.41□□□□□ -0.58
LINC00399-201ENST00000439008 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
LINC00399-201ENST00000439008 IGHV4-30-2A0A087WSY4 118 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 B9A039 149 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
LINC00399-201ENST00000439008 TIPRLO75663 272 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 SNAP29O95721 258 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 TFP02787 698 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 INHBBP09529 407 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 NR2C1P13056 603 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 STOMP27105 288 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 CBX1P83916 185 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 HSF2Q03933 536 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC00399-201ENST00000439008 MAD2L1BPQ15013 274 aaPredicted RBP11.4□□□□□ -0.58
LINC00399-201ENST00000439008 KCNMB1Q16558 191 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 LYPD4Q6UWN0 246 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 ASRGL1Q7L266 308 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 GLB1L2Q8IW92 636 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 LINC00471Q8N535 108 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 OR52E2Q8NGJ4 325 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 GIPC3Q8TF64 312 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 SLC7A6Q92536 515 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 MRPL24Q96A35 216 aaKnown RBP11.4□□□□□ -0.58
LINC00399-201ENST00000439008 SYT3Q9BQG1 590 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 TSSK6Q9BXA6 273 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.58
LINC00399-201ENST00000439008 LHFPL6Q9Y693 200 aa11.4□□□□□ -0.58
LINC00399-201ENST00000439008 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 C5orf49A4QMS7 147 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 IDH3BO43837 385 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ENTPD5O75356 428 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 NGFP01138 241 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 FOSL1P15407 271 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 NOS3P29474 1203 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 PYCR1P32322 319 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ALDH3B1P43353 468 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 UCP2P55851 309 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 PLP2Q04941 152 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 RAB35Q15286 201 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 TBC1D28Q2M2D7 210 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 CCDC92Q53HC0 331 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 CD300LDQ6UXZ3 194 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 Q71RC1 249 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 VASH1Q7L8A9 365 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ZBTB46Q86UZ6 589 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 LNX2Q8N448 690 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 SLC26A10Q8NG04 563 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 GTF3AQ92664 365 aaKnown RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 SNX18Q96RF0 628 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 NDEL1Q9GZM8 345 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 CDH20Q9HBT6 801 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 MRPL22Q9NWU5 206 aaKnown RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 PDP1Q9P0J1 537 aaPredicted RBP11.39□□□□□ -0.59
LINC00399-201ENST00000439008 FBXL3Q9UKT7 428 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 CMAHPQ9Y471 501 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 PMF1-BGLAPU3KQ54 211 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
LINC00399-201ENST00000439008 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 C12orf71A8MTZ7 269 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 RER1O15258 196 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SYNGR3O43761 229 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 ATP5HO75947 161 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 STAMBPO95630 424 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 LY6G6DO95868 133 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 F12P00748 615 aaPredicted RBP11.38□□□□□ -0.59
LINC00399-201ENST00000439008 ADRA2AP08913 450 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms