RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SHISA6Q6ZSJ9 500 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 GPX8Q8TED1 209 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 SLC25A28Q96A46 364 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 SEH1LQ96EE3 360 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 SLC25A44Q96H78 314 aaPredicted RBP14.2□□□□□ -0.14
CDH1-202ENST00000422392 CMKLR1Q99788 373 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 PELOQ9BRX2 385 aaKnown RBP14.2□□□□□ -0.14
CDH1-202ENST00000422392 FBXL2Q9UKC9 423 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 FARSAQ9Y285 508 aaKnown RBP14.2□□□□□ -0.14
CDH1-202ENST00000422392 TMED7Q9Y3B3 224 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 EMC9Q9Y3B6 208 aa14.2□□□□□ -0.14
CDH1-202ENST00000422392 RTTNQ86VV8 2226 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 GP1BBP13224 206 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 GABRA1P14867 456 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 HTR2CP28335 458 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 GALNSP34059 522 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 SCAND1P57086 179 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 NSDHLQ15738 373 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 SGCBQ16585 318 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 GSG1LQ6UXU4 331 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 LINC00346Q8IVM7 164 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 GPR119Q8TDV5 335 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 NKD1Q969G9 470 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 ZNF587Q96SQ5 575 aaPredicted RBP14.19□□□□□ -0.14
CDH1-202ENST00000422392 EPHA6Q9UF33 1036 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 SLC22A23A1A5C7 686 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 HMSDA8MTL9 139 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 TSPAN4O14817 238 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 ABCD3P28288 659 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 SLC6A8P48029 635 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 LBX1P52954 281 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 NR0B2Q15466 257 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 C1orf189Q5VU69 101 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 HLA-DQA1Q5Y7H0 255 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 LRFN4Q6PJG9 635 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 MESP1Q9BRJ9 268 aa14.19□□□□□ -0.14
CDH1-202ENST00000422392 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
CDH1-202ENST00000422392 MRTO4Q9UKD2 239 aaKnown RBP14.19□□□□□ -0.14
CDH1-202ENST00000422392 CNTRLQ7Z7A1 2325 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 ASCC3Q8N3C0 2202 aaKnown RBP14.18□□□□□ -0.14
CDH1-202ENST00000422392 LOC100509620A0A075B734 347 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 IGKV3D-11A0A0A0MRZ8 115 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 A0A1W2PPC1 479 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 FITM1A5D6W6 292 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 TLCD2A6NGC4 264 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 TSPAN2O60636 221 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 AMY2AP04746 511 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 PPP3CBP16298 524 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 ZNF28P17035 718 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 LTBRP36941 435 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 RIDAP52758 137 aaKnown RBP14.18□□□□□ -0.14
CDH1-202ENST00000422392 FDX2Q6P4F2 183 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 OR4S1Q8NGB4 309 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 SCARB1Q8WTV0 552 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 TMEM235A6NFC5 223 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 RAB3DO95716 219 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 HOXD4P09016 255 aaPredicted RBP14.18□□□□□ -0.14
CDH1-202ENST00000422392 OR4E1P0C645 316 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 PGCP20142 388 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 BTN1A1Q13410 526 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 ELOCQ15369 112 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 SCGB2B2Q4G0G5 96 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 C1orf140Q5VVS0 124 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 CATSPERDQ86XM0 798 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
CDH1-202ENST00000422392 TXNIPQ9H3M7 391 aa14.18□□□□□ -0.14
CDH1-202ENST00000422392 ALG1L2C9J202 215 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 SOX1O00570 391 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 EIF1AYO14602 144 aaKnown RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 RLN2P04090 185 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ITGB2P05107 769 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ZP3P21754 424 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 NKPD1Q17RQ9 610 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 LY6G6FQ5SQ64 297 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ZNF660Q6AZW8 331 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 CORO6Q6QEF8 472 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 LANCL3Q6ZV70 420 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 STPG2Q8N412 459 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ACBD4Q8NC06 268 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 OR6M1Q8NGM8 313 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 OR1J2Q8NGS2 313 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 OR13C3Q8NGS6 347 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 SLC41A2Q96JW4 573 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 MFFQ9GZY8 342 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 C8orf33Q9H7E9 229 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 C12orf10Q9HB07 376 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 PRMT8Q9NR22 394 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 MED11Q9P086 117 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 CKLFQ9UBR5 152 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 IGHV3-20A0A0C4DH32 117 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 TMEM82A0PJX8 343 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 TUBAL3A6NHL2 446 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 B3GALNT1O75752 331 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ATF4P18848 351 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 NUP62P37198 522 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 GK2Q14410 553 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 LRRC37A5PQ49AS3 106 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms