RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 AADACL4Q5VUY2 407 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 LEG1Q6P5S2 330 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 KRTAP1-3Q8IUG1 177 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 OR6V1Q8N148 313 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 CIARTQ8N365 385 aaPredicted RBP8.03□□□□□ -1.12
VPS53-203ENST00000401468 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 GALNT4Q8N4A0 578 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 SYT14Q8NB59 555 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 SDR9C7Q8NEX9 313 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 OR52E2Q8NGJ4 325 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 OR4K13Q8NH42 304 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 FBLIM1Q8WUP2 373 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 TFAP2CQ92754 450 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 PTP4A1Q93096 173 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 NABP1Q96AH0 204 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 PERPQ96FX8 193 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 ALKBH3Q96Q83 286 aaPredicted RBP8.03□□□□□ -1.12
VPS53-203ENST00000401468 SLC38A2Q96QD8 506 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 NMNAT3Q96T66 252 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 FOXC2Q99958 501 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 HDHD5Q9BXW7 423 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 PRRG3Q9BZD7 231 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 ULBP2Q9BZM5 246 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 SYT4Q9H2B2 425 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 VCXQ9H320 206 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 RIBC2Q9H4K1 309 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 B3GAT2Q9NPZ5 323 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 HINT3Q9NQE9 182 aaKnown RBP8.03□□□□□ -1.12
VPS53-203ENST00000401468 GPR52Q9Y2T5 361 aa8.03□□□□□ -1.12
VPS53-203ENST00000401468 ARPC4-TTLL3A0A0A6YYG9 625 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 RIIAD1A6NNX1 92 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
VPS53-203ENST00000401468 M0R3G1 203 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CASKO14936 926 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 PRODHO43272 600 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 IGHV3-9P01782 118 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 THBDP07204 575 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 GAAP10253 952 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CAPGP40121 348 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CENPAP49450 140 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 NR1H2P55055 460 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 AQP4P55087 323 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CDC42P60953 191 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TEKQ02763 1124 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TGFBR3Q03167 851 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 IL18R1Q13478 541 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 PCK2Q16822 640 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CEACAM16Q2WEN9 425 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 ZIK1Q3SY52 487 aaPredicted RBP8.02□□□□□ -1.13
VPS53-203ENST00000401468 SLC35D3Q5M8T2 416 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 SLC35F1Q5T1Q4 408 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 ZNF691Q5VV52 312 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TTC23Q5W5X9 447 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CARD17Q5XLA6 110 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 OR7E24Q6IFN5 339 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 DNM1P34Q6PK57 102 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 SEZ6L2Q6UXD5 910 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 SSX8Q7RTT4 187 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 P2RY8Q86VZ1 359 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 JAZF1Q86VZ6 243 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 CXorf67Q86X51 503 aaPredicted RBP8.02□□□□□ -1.13
VPS53-203ENST00000401468 OR8J1Q8NGP2 316 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 OR1K1Q8NGR3 316 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 OR6N1Q8NGY5 312 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 RHOXF1Q8NHV9 184 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TMEM163Q8TC26 289 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
VPS53-203ENST00000401468 NEUROG1Q92886 237 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 RBP7Q96R05 134 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 FOXB1Q99853 325 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 WACQ9BTA9 647 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 HCAR1Q9BXC0 346 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TEX12Q9BXU0 123 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 NUAK2Q9H093 628 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 MARCH7Q9H992 704 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 TMEM38BQ9NVV0 291 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 ZNF224Q9NZL3 707 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 UPB1Q9UBR1 384 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 B9D1Q9UPM9 204 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 HSPE1-MOB4S4R3N1 261 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 ARFGEF3Q5TH69 2177 aa8.02□□□□□ -1.13
VPS53-203ENST00000401468 FN1P02751 2386 aaKnown RBP8.02□□□□□ -1.13
VPS53-203ENST00000401468 FBN1P35555 2871 aaKnown RBP8.01□□□□□ -1.13
VPS53-203ENST00000401468 CSPG4Q6UVK1 2322 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 OR5H1A6NKK0 313 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 H7C1C5 153 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 KHDRBS3O75525 346 aaKnown RBP8.01□□□□□ -1.13
VPS53-203ENST00000401468 RENP00797 406 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 PPP3CBP16298 524 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 SPI1P17947 270 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 NPR2P20594 1047 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 PAX7P23759 505 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 PEX19P40855 299 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 HSPA13P48723 471 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 ISL1P61371 349 aa8.01□□□□□ -1.13
VPS53-203ENST00000401468 LSM6P62312 80 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms