RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ZNF544Q6NX49 715 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 VHLLQ6RSH7 139 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 FBXL14Q8N1E6 418 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 PARP8Q8N3A8 854 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 OR9Q1Q8NGQ5 310 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 OR2H1Q9GZK4 316 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 WNT5BQ9H1J7 359 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 C1orf198Q9H425 327 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 CMC2Q9NRP2 79 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 CA10Q9NS85 328 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 KRT84Q9NSB2 600 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 BEX4Q9NWD9 120 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 POLR1DQ9Y2S0 133 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 TIMM10BQ9Y5J6 103 aa18.34■□□□□ 0.53
TSPAN4-206ENST00000397408 SAC3D1A6NKF1 404 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 PTHP01270 115 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 CCL2P13500 99 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 ZNF35P13682 527 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 ZNF3P17036 446 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 APEX1P27695 318 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 PYCR1P32322 319 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 TTKP33981 857 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 LSM6P62312 80 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 SNTB2Q13425 540 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 MEP1BQ16820 701 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 TBC1D28Q2M2D7 210 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 KRT80Q6KB66 452 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 ACSM5Q6NUN0 579 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 SYT9Q86SS6 491 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 DTX2Q86UW9 622 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 MUC15Q8N387 334 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 CPEB3Q8NE35 698 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 NUP37Q8NFH4 326 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 PROKR2Q8NFJ6 384 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 OR2T4Q8NH00 348 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 RBM4Q9BWF3 364 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 ARID1AO14497 2285 aa18.33■□□□□ 0.53
TSPAN4-206ENST00000397408 RTTNQ86VV8 2226 aa18.33■□□□□ 0.52
TSPAN4-206ENST00000397408 SMPD2O60906 423 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 MITFO75030 526 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 APLNRP35414 380 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 GALK2Q01415 458 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 SCRN3Q0VDG4 424 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 AQP6Q13520 282 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 DAG1Q14118 895 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 KCNMB1Q16558 191 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 AGAP6Q5VW22 663 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 ZNF774Q6NX45 483 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 SLC26A10Q8NG04 563 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 FOXC2Q99958 501 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 WACQ9BTA9 647 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 TRAF4Q9BUZ4 470 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 CXorf56Q9H5V9 222 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 CDH20Q9HBT6 801 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 S100A14Q9HCY8 104 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 ASH2LQ9UBL3 628 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 CD8AP01732 235 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 HLA-DQA2P01906 255 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 NR4A1P22736 598 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 APOBEC3AP31941 199 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 CRISP1P54107 249 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 NKX6-1P78426 367 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 CDK5Q00535 292 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 TMEM236Q5W0B7 351 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 KDM4DQ6B0I6 523 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 PAQR4Q8N4S7 273 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 OR10H5Q8NGA6 315 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 OR51L1Q8NGJ5 315 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 OR1J2Q8NGS2 313 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 SLC25A19Q9HC21 320 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 SPEF1Q9Y4P9 236 aa18.32■□□□□ 0.52
TSPAN4-206ENST00000397408 FAM183AA6NL82 134 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 TMCC2O75069 709 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 TFP02787 698 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 GYPBP06028 91 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 IGFBP5P24593 272 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 STOMP27105 288 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 THBS4P35443 961 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 SLC25A1P53007 311 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 ALDH16A1Q8IZ83 802 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 OTULINQ96BN8 352 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 NMNAT2Q9BZQ4 307 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 ZNF442Q9H7R0 627 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 CBLN4Q9NTU7 201 aa18.31■□□□□ 0.52
TSPAN4-206ENST00000397408 PRRC2AP48634 2157 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 SURF4O15260 269 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 SGCEO43556 437 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 DOK2O60496 412 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 SNAP29O95721 258 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 HMGN1P05114 100 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 CLUP10909 449 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 SPI1P17947 270 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 CCNOP22674 350 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 CDKN1AP38936 164 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 ESRRGP62508 458 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 TEKQ02763 1124 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 ADIPOQQ15848 244 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 ZNRF4Q8WWF5 429 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 STMN2Q93045 179 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms