RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 IL7P13232 177 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 THBS2P35442 1172 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 MRPL28Q13084 256 aaKnown RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 MZT2AQ6P582 158 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 UNQ9370/PRO34162Q6UXP9 181 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 FGD2Q7Z6J4 655 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 SCAIQ8N9R8 606 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 SNX33Q8WV41 574 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 CPNE4Q96A23 557 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF845Q96IR2 970 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 TSSK2Q96PF2 358 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 NAA11Q9BSU3 229 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 SRXN1Q9BYN0 137 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 TXNIPQ9H3M7 391 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 CHST11Q9NPF2 352 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ACOXLQ9NUZ1 547 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 GTF3C1Q12789 2109 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 FABP12A6NFH5 140 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 HSPB2A8KAH6 182 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 PLPP3O14495 311 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 GATBO75879 557 aaKnown RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 AKR7A3O95154 331 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 OR6A2O95222 327 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 SYNGR4O95473 234 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ABHD16AO95870 558 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 UCHL1P09936 223 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 EDN3P14138 238 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ABOP16442 354 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ENPP1P22413 925 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 MYL9P24844 172 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ACVR1BP36896 505 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ZP4Q12836 540 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 HSPB2Q16082 182 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 BAK1Q16611 211 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ACSM3Q53FZ2 586 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 H1FNTQ75WM6 255 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 GDPD3Q7L5L3 318 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 KCTD20Q7Z5Y7 419 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 CEACAM19Q7Z692 300 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 CADM3Q8N126 398 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 OR6V1Q8N148 313 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF511Q8NB15 262 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 OR5M9Q8NGP3 310 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 PHYHIPQ92561 330 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 DIRAS2Q96HU8 199 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 TTTY10Q9BZA0 68 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ZCCHC4Q9H5U6 513 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 PPP1R3EQ9H7J1 279 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 MCTS1Q9ULC4 181 aaKnown RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 B3GALT5Q9Y2C3 310 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 MAGEB4O15481 346 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-207ENST00000397200 HPGDSO60760 199 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 SLC19A2O60779 497 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 TPOP07202 933 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CAPN3-207ENST00000397200 SPNP16150 400 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 EVX1P49640 407 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 RBPJQ06330 500 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
CAPN3-207ENST00000397200 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 FAM131AQ6UXB0 335 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 C14orf119Q9NWQ9 140 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 ADAM30Q9UKF2 790 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 KLHDC2Q9Y2U9 406 aa13.23□□□□□ -0.29
CAPN3-207ENST00000397200 IGHV3-15A0A0B4J1V0 119 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 A0A1W2PRG6 482 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 PRSS37A4D1T9 235 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 AQP7P3A6NL99 342 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 H7C1C5 153 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 UPK3AO75631 287 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 SERPINI2O75830 405 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 CSF3P09919 207 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 CENPAP49450 140 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 AGFG1P52594 562 aaKnown RBP13.22□□□□□ -0.29
CAPN3-207ENST00000397200 LCN6P62502 163 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 H3F3AP84243 136 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 SF3B4Q15427 424 aaKnown RBP eCLIP13.22□□□□□ -0.297e-8■■■■□ 26.4
CAPN3-207ENST00000397200 ACKR1Q16570 336 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF585AQ6P3V2 769 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 SFXN4Q6P4A7 337 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 CNIH2Q6PI25 160 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 OR8H2Q8N162 312 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 OR13C5Q8NGS8 318 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 FAM57AQ8TBR7 257 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 CHAC2Q8WUX2 184 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 UCN2Q96RP3 112 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 SYT4Q9H2B2 425 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 WDR76Q9H967 626 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 COMMD3Q9UBI1 195 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 IGSF10Q6WRI0 2623 aa13.22□□□□□ -0.29
CAPN3-207ENST00000397200 IGLV1-36A0A0B4J1U3 117 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 TRBV2A0A0J9YWF9 115 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 A0A1W2PQ09 198 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms