RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GRK5P34947 590 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 DAPP51397 102 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 GLO1Q04760 184 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 GINS1Q14691 196 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 KCNMB1Q16558 191 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 TBC1D28Q2M2D7 210 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF362Q5T0B9 420 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 SLC27A4Q6P1M0 643 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 FAHD1Q6P587 224 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 VHLLQ6RSH7 139 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 LRRC75A-AS1Q8N1F1 130 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 SVOPLQ8N434 492 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 CYB561A3Q8NBI2 242 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 SLC37A3Q8NCC5 494 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 C11orf40Q8WZ69 217 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 DDOQ99489 341 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 OR2H1Q9GZK4 316 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 CXXC4Q9H2H0 198 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 PAPOLBQ9NRJ5 636 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 CBLN4Q9NTU7 201 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 RIIAD1A6NNX1 92 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 STOMP27105 288 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 APEX1P27695 318 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 SCRN3Q0VDG4 424 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 KRT80Q6KB66 452 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 IQCF1Q8N6M8 205 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 CPEB3Q8NE35 698 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 OR2T4Q8NH00 348 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 AKR7LQ8NHP1 331 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 TRMT61AQ96FX7 289 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 TEX12Q9BXU0 123 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 WNT5BQ9H1J7 359 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 SEMA6AQ9H2E6 1030 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 FN3KQ9H479 309 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF442Q9H7R0 627 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 CMC2Q9NRP2 79 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 ARID1AO14497 2285 aa16.43■□□□□ 0.22
PDLIM7-204ENST00000393546 FAM171A2A8MVW0 826 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 OVOL3O00110 214 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 GPANK1O95872 356 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 HLA-DQA2P01906 255 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 HMGN1P05114 100 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 OR4A8P0C604 315 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 BMP4P12644 408 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 CCL2P13500 99 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 PAX1P15863 534 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF3P17036 446 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 THBS4P35443 961 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 SERPINF1P36955 418 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 GDI2P50395 445 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 NKX6-1P78426 367 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 AQP6Q13520 282 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 CRMP1Q14194 572 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 TESK1Q15569 626 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 ACSM5Q6NUN0 579 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 PROKR2Q8NFJ6 384 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 OR10H5Q8NGA6 315 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 GSX2Q9BZM3 304 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF701Q9NV72 531 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 POLR1DQ9Y2S0 133 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 PRRC2AP48634 2157 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
PDLIM7-204ENST00000393546 USF3Q68DE3 2245 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 SNAP29O95721 258 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 GAAP10253 952 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 CCNOP22674 350 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 GLRXP35754 106 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 PTH2RP49190 550 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 SLC25A1P53007 311 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 CRISP1P54107 249 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 CDK5Q00535 292 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 TEKQ02763 1124 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 ADIPOQQ15848 244 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF774Q6NX45 483 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 PARP8Q8N3A8 854 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 ICA1LQ8NDH6 482 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 SLC26A10Q8NG04 563 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 PERPQ96FX8 193 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 POM121L2Q96KW2 1035 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 RBM4Q9BWF3 364 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 CDADC1Q9BWV3 514 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 GABARAPL1Q9H0R8 117 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 KRT84Q9NSB2 600 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 ASH2LQ9UBL3 628 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 CMAHPQ9Y471 501 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 PMF1-BGLAPU3KQ54 211 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 AKAP9Q99996 3911 aa16.41■□□□□ 0.22
PDLIM7-204ENST00000393546 C5orf49A4QMS7 147 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 B9A039 149 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 H3BNX3 289 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 SGCEO43556 437 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 TFP02787 698 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 COX5BP10606 129 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 PYCR1P32322 319 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 CDKN1AP38936 164 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 RAD52P43351 418 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 RPS23P62266 143 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms