RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PDSS1Q5T2R2 415 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ABLIM2Q6H8Q1 611 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 MZT2AQ6P582 158 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 LRFN4Q6PJG9 635 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 GALNTL5Q7Z4T8 443 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 TMEM123Q8N131 208 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZIC4Q8N9L1 334 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CPNE4Q96A23 557 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 INTS12Q96CB8 462 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 SCMH1Q96GD3 660 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 DERL3Q96Q80 235 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 COMMD4Q9H0A8 199 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 TIGARQ9NQ88 270 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 V9GYH0 126 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CACNA1CQ13936 2221 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZFHX2Q9C0A1 2572 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A0G2JK05 382 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 TRABD2BA6NFA1 517 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CXCL13O43927 109 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 UPK1BO75841 260 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 WT1P19544 449 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 RAB3BP20337 219 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 MAPK3P27361 379 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 RFC3P40938 356 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 MAGEA5P43359 124 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 KIR3DL2P43630 455 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 EIF1AXP47813 144 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CSNK1A1P48729 337 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ARG2P78540 354 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 PLGLB1Q02325 96 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CLN3Q13286 438 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF181Q2M3W8 571 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 RGS21Q2M5E4 152 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 Q499Y3 187 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 WDR38Q5JTN6 314 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF544Q6NX49 715 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 SFXN4Q6P4A7 337 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 LINC00346Q8IVM7 164 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 UBQLNLQ8IYU4 475 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 TMEM251Q8N6I4 163 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZFP62Q8NB50 900 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 RNF133Q8WVZ7 376 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 PNPLA2Q96AD5 504 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A087WV48 116 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A1B0GTH9 108 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF716A6NP11 495 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 PIN1P1O15428 100 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 SRSF10O75494 262 aaKnown RBP10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 CELA3AP09093 270 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 LHX2P50458 406 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR7E24Q6IFN5 339 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF676Q8N7Q3 588 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZCCHC4Q9H5U6 513 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 NOX4Q9NPH5 578 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 FOXD3Q9UJU5 478 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 RCE1Q9Y256 329 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 UGT2A1Q9Y4X1 527 aa10.15□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A1W2PPK0 400 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM166BA8MTA8 275 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 GPR171O14626 319 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 PNPP00491 289 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 SRMP19623 302 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 THBS2P35442 1172 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 OR10A3P58181 314 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 CDC20Q12834 499 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 IDNKQ5T6J7 187 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 FOXL2NBQ6ZUU3 175 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 SPATC1Q76KD6 591 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 RHOUQ7L0Q8 258 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 CATSPERDQ86XM0 798 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 SNX29P2Q8IUI4 249 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 TMEM178AQ8NBL3 297 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 OR6N1Q8NGY5 312 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 CHPT1Q8WUD6 406 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 THRSPQ92748 146 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 CCDC32Q9BV29 185 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 C1orf198Q9H425 327 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 SEC61A2Q9H9S3 476 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 POLE4Q9NR33 117 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 COMMD3Q9UBI1 195 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 R4GMQ9 66 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 GVINP1Q7Z2Y8 2422 aa10.15□□□□□ -0.79
SMARCAL1-203ENST00000392128 ISPDA4D126 451 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 ANKRD61A6NGH8 418 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 ACOD1A6NK06 481 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF891A8MT65 544 aaPredicted RBP10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 NOTOA8MTQ0 251 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 CYTIPO60759 359 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 OCM2P0CE71 109 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF708P17019 499 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 DCTDP32321 178 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 SELENOPP49908 381 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 CLDN18P56856 261 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 MFGE8Q08431 387 aaPredicted RBP10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF766Q5HY98 468 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 CEP78Q5JTW2 689 aa10.14□□□□□ -0.79
SMARCAL1-203ENST00000392128 CORO6Q6QEF8 472 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms