RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OR5AK2Q8NH90 309 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 OR5B2Q96R09 309 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ELF4Q99607 663 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC17A9Q9BYT1 436 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 NRSN2Q9GZP1 204 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 PCYT1BQ9Y5K3 369 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 A0A0C4DFX4 3053 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 WASP42768 502 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 DUSP8Q13202 625 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ERV3-1Q14264 604 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF239Q16600 458 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SCGB2B2Q4G0G5 96 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ARHGAP40Q5TG30 622 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 C1QL4Q86Z23 238 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SECTM1Q8WVN6 248 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 PHB2Q99623 299 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CES1P1Q9UKY3 287 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 VCANP13611 3396 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 TRBV5-7A0A0A0MS05 114 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 TVP23AA6NH52 213 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 IFNA2P01563 188 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 PSMB5P28074 263 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 GRPRP30550 384 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC9A5Q14940 896 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 C2orf76Q3KRA6 126 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 NSUN5P2Q63ZY6 315 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF585AQ6P3V2 769 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 NEU1Q99519 415 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 SSX3Q99909 188 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF559Q9BR84 538 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 FN3KRPQ9HA64 309 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 FRRS1LQ9P0K9 344 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 POMT1Q9Y6A1 747 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 TRPM6Q9BX84 2022 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 P2RX6O15547 441 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 MBTPS2O43462 519 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 HYAL4Q2M3T9 481 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 PARPBPQ9NWS1 579 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 FARSAQ9Y285 508 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 ADAM18Q9Y3Q7 739 aa13.25□□□□□ -0.29
VPS9D1-201ENST00000389386 DUXAA6NLW8 204 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 H0YIZ8 118 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 CDC40O60508 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 MED6O75586 246 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 UPK3AO75631 287 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 AIFM1O95831 613 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 IFNA17P01571 189 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 HEXBP07686 556 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 THBS1P07996 1170 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 LAMP2P13473 410 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF28P17035 718 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 KCTD9Q7L273 389 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 RNASE11Q8TAA1 199 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF417Q8TAU3 575 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ARSGQ96EG1 525 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 LURAP1Q96LR2 239 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 LRFN5Q96NI6 719 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 PIGQQ9BRB3 760 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ADAM19Q9H013 955 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 IER3IP1Q9Y5U9 82 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 MSGN1A6NI15 193 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 BCAT2O15382 392 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 LRP3O75074 770 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 STATHP02808 62 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ITGA5P08648 1049 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 AK4P27144 223 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 CFPP27918 469 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 S100A2P29034 98 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 IL13RA1P78552 427 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 ELOCQ15369 112 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 UNQ6494/PRO21346Q6UXR6 183 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 OR6K6Q8NGW6 343 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC17A5Q9NRA2 495 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 HEATR5BQ9P2D3 2071 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 C2orf16Q68DN1 1984 aa13.24□□□□□ -0.29
VPS9D1-201ENST00000389386 C5orf51A6NDU8 294 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 C4orf51C9J302 202 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 CYB5AP00167 134 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 AK1P00568 194 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 GPR1P46091 355 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 CLINT1Q14677 625 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 ARHGAP11BQ3KRB8 267 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 MRPL2Q5T653 305 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 AWAT2Q6E213 333 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms