RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CNN2Q99439 309 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 TBX5Q99593 518 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 MRI1Q9BV20 369 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 BEX2Q9BXY8 128 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 SLC19A3Q9BZV2 496 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ABCG5Q9H222 651 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 METTL7AQ9H8H3 244 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 EMC7Q9NPA0 242 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 B3GNT2Q9NY97 397 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 EMC3Q9P0I2 261 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 CHRNA9Q9UGM1 479 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 MEMO1Q9Y316 297 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 SLC6A5Q9Y345 797 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ZC3H12DA2A288 527 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 E9PI62 339 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 NPIPB9F8W1W9 429 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 TP53I11O14683 189 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ARPC3O15145 178 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 FZD7O75084 574 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 UCHL1P09936 223 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 NAGAP17050 411 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 FUT1P19526 365 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 SLC16A1P53985 500 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 P2RX3P56373 397 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 DCAF7P61962 342 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 FHL1Q13642 323 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 CDK5R1Q15078 307 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 GXYLT1Q4G148 440 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ALG10BQ5I7T1 473 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 WIPI1Q5MNZ9 446 aaPredicted RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 NUP54Q7Z3B4 507 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 YRDCQ86U90 279 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 ZNF440Q8IYI8 595 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 LRRC17Q8N6Y2 441 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 GHSRQ92847 366 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 OR2M2Q96R28 347 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 DMRTA2Q96SC8 542 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 G6PC3Q9BUM1 346 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 PPIL3Q9H2H8 161 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 CAMK2AQ9UQM7 478 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 FAM215AQ9Y5M1 114 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 PHF3Q92576 2039 aaKnown RBP11.05□□□□□ -0.64
VRK3-202ENST00000377011 TRAV27A0A087WT01 109 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 NPIPA5A0A0B4J1W7 369 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 NPIPA7E9PJI5 369 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 DVL2O14641 736 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 FADS1O60427 444 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 NPIPA8P0DM63 369 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 GDF1P27539 372 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 PYCR1P32322 319 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 AGFG1P52594 562 aaKnown RBP11.05□□□□□ -0.64
VRK3-202ENST00000377011 OR12D2P58182 307 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 DYRK1AQ13627 763 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 SLC10A1Q14973 349 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 CD276Q5ZPR3 534 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 ZNF787Q6DD87 383 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 UNQ9370/PRO34162Q6UXP9 181 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 B3GLCTQ6Y288 498 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 DND1Q8IYX4 353 aaKnown RBP11.05□□□□□ -0.64
VRK3-202ENST00000377011 CADM2Q8N3J6 435 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 OR51A7Q8NH64 312 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 RPS4Y2Q8TD47 263 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 SGTBQ96EQ0 304 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 TNFRSF13CQ96RJ3 184 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 GPX7Q96SL4 187 aaPredicted RBP11.05□□□□□ -0.64
VRK3-202ENST00000377011 NPAS1Q99742 590 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 ACTR6Q9GZN1 396 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 MED28Q9H204 178 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 KLRF1Q9NZS2 232 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 RPS6KB2Q9UBS0 482 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 SPATA2Q9UM82 520 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 APCP25054 2843 aa11.05□□□□□ -0.64
VRK3-202ENST00000377011 CACNA1DQ01668 2161 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 TRGV5A0A0B4J1U4 118 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 A0A1B0GUH1 482 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 LRRN3E7EW58 273 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 C19orf84I3L1E1 186 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ACOT7O00154 380 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PDCD5O14737 125 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 GMFGO60234 142 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 NOS1APO75052 506 aaPredicted RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 TRAPPC6AO75865 159 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 TPPPO94811 219 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PAHP00439 452 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 MRPL3P09001 348 aaKnown RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 STOMP27105 288 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 BTCP35070 178 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR3A3P47888 321 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 DIO1P49895 249 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 GDI2P50395 445 aaKnown RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 SIRPAP78324 504 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms